The package allows for predicting whether a coiled coil sequence (amino acid sequence plus heptad register) is more likely to form a dimer or more likely to form a trimer. Additionally to the prediction itself, a prediction profile is computed which allows for determining the strengths to which the individual residues are indicative for either class. Prediction profiles can also be visualized as curves or heatmaps.
|Date of publication||None|
|Maintainer||Ulrich Bodenhofer <email@example.com>|
|License||GPL (>= 2)|
CCModel-class: Class "CCModel"
CCModel-FileOps: Reading and writing of coiled coil prediction model from/to...
CCProfile-class: Class "CCProfile"
plot-methods: Plotting prediction profiles
predict-methods: Predict oligomerization of one or more coiled coil segments
procoil-package: Prediction of Oligomerization of Coiled Coil Proteins