pvac: PCA-based gene filtering for Affymetrix arrays

The package contains the function for filtering genes by the proportion of variation accounted for by the first principal component (PVAC).

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("pvac")
AuthorJun Lu and Pierre R. Bushel
Bioconductor views Microarray OneChannel QualityControl
Date of publicationNone
MaintainerJun Lu <jlu276@gmail.com>, Pierre R. Bushel <bushel@niehs.nih.gov>
LicenseLGPL (>= 2.0)
Version1.24.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/pvac.R
build
build/vignette.rds
inst
inst/doc
inst/doc/pvac.R
inst/doc/pvac.Rnw
inst/doc/pvac.pdf
man
man/pvacFilter.Rd
vignettes
vignettes/density.pdf
vignettes/pvac.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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