NEWS.md

In rpx: R Interface to the ProteomeXchange Repository

rpx 1.26

rpx 1.26.2

• Use MS:1002852 to get URL when PRIDE:0000411 returns empty string.

rpx 1.26.1

• Using BiocFileCache to cache PXD files that are downloaded (backported from devel 1.99.2).

Changes in version 1.26.0

• New release version

rpx 1.23

Changes in version 1.23.1

• Define modifiable rpx_fix_issue_5 <2019-11-26 Tue>

Changes in version 1.23.0

• New devel version

rpx 1.21

Changes in version 1.21.3

• Update NEWS titles

Changes in version 1.21.2

• Temporary fix for issue #5 (wrong URL from PRIDE server) <2019-10-02 Wed>

Changes in version 1.21.1

• Don't set old class <2019-08-09 Fri>

rpx 1.19

Changes in version 1.19.4

• Delete plain NEWS now that R supports NEWS.md

Changes in version 1.19.3

• Fix NEWS

Changes in version 1.19.2

• Mention setting method on Windows <2019-04-16 Tue>

Changes in version 1.19.1

• Add ImmunoOncology biocView

Changes in version 1.19.0

• New release for Bioc 3.9

rpx 1.18

Changes in version 1.18.0

• New release for Bioc 3.8

rpx 1.17

Changes in version 1.17.2

• Update NEWS and pkgdown site

Changes in version 1.17.1

• replace BiocInstaller biocLite mentions with BiocManager

Changes in version 1.17.0

• New version for Bioconductor devel

rpx 1.16

Changes in version 1.16.0

• New version for Bioconductor release

rpx 1.13

Changes in version 1.13.5

• Nothing yet

Changes in version 1.13.4

• Restore reference unit test

Changes in version 1.13.3

• No commit

Changes in version 1.13.2

• Fix errors due to changes on PX side. PXD000001 reference remains untested - see https://twitter.com/lgatt0/status/885091284142239744 for details. <2017-07-12 Wed>

Changes in version 1.13.1

• Using xml2 <2017-06-13 Tue>
• Use functions instead of methods <2017-06-13 Tue>

Changes in version 1.13.0

• Bioc devel 3.6

rpx 1.12

Changes in version 1.12.1

• Using xml2 (backported from devel) <2017-06-13 Tue>
• Use functions instead of methods (backported from devel) <2017-06-13 Tue>

Changes in version 1.12.0

• Bioc release 3.5

rpx 1.11

Changes in version 1.11.0

• Bioc devel 3.4

Changes in version 1.11.4

• Update unit test to reflect upstream changes <2017-02-26 Sun>

Changes in version 1.11.3

• pxget gains a destdir argument to specify the destination to which files should be downloaded <2017-01-27 Fri>

Changes in version 1.11.2

• Update unit test to reflect upstream changes <2017-01-25 Wed>

Changes in version 1.11.1

• Migrate vignette to BiocStyle::html_document2 <2016-12-22 Thu>
• Use NEWS.md <2016-12-28 Wed>

Changes in version 1.11.0

• Bioconductor devel 3.5

rpx 1.10

Changes in version 1.10.0

• Bioconductor release 3.4

rpx 1.9

Changes in version 1.9.4

• Updating unit tests <2016-10-04 Tue>

Changes in version 1.9.3

• Update vignette to use readMzTabData v0.9 <2016-07-24 Sun>

rpx 1.5

Changes in version 1.5.1

• unit tests <2015-06-30 Tue>
• export and document pxnodes <2015-06-30 Tue>

Changes in version 1.5.0

• Bioc version 3.2 (devel)

rpx 1.4

Changes in version 1.4.0

• Bioc version 3.1 (release)

rpx 1.3

Changes in version 1.3.1

• update vignette to reflect new files in px example, and avoid downloaded the raw data [2015-03-31 Tue]

rpx 0.99

Changes in version 0.99.9

• In pxref, dealing with cases without any-r pending publications [2014-04-01 Tue]

Changes in version 0.99.8

• fix leftover issues from renaming package (d.tenenbaum) [2014-03-30 Sun]

Changes in version 0.99.7

• renamed to rpx due to CRAN name clash [2014-03-28]

Changes in version 0.99.6

• more typos in vignette [2014-03-12 Wed]

Changes in version 0.99.5

• Suggestions, biocView and typos reported by Nate Hayden [2014-03-12 Wed]
• added Runit test [2014-03-12 Wed]
• use ae fonts in vignette [2014-03-12 Wed]

Changes in version 0.99.4

• Update reference in man and vignette [2014-03-11 Tue]
• Typos in vignette [2014-03-11 Tue]

Changes in version 0.99.3

• reverting pxannounced to empty signature to fix warning [2014-03-05 Wed]

Changes in version 0.99.2

• replacing download.file by getURL to download annoucement rss-ver https <2014-03-05 Wed>

Changes in version 0.99.1

• fixing pxfiles ending by \r-n Windows [2014-03-05 Wed]

Changes in version 0.99.0

• added a vignette [2014-03-05 Wed]
• handle invalid identifiers [2014-03-05 Wed]

rpx documentation built on March 14, 2021, 6:02 p.m.