API for sRACIPE
Systems biology tool to simulate gene regulatory circuits
| Global functions | |
|---|---|
| .ClustFunction | Source code |
| .ModelPvalue | Man page Source code |
| .NthMin | Man page Source code |
| .PermutedVar | Man page Source code |
| .RacipeSE | Man page |
| .SimulatedPValueAbs | Man page Source code |
| .SimulatedVarPValue | Man page Source code |
| .loadNetworkFile | Man page Source code |
| CoupledToggleSwitchSA | Man page |
| EMT1 | Man page |
| EMT2 | Man page |
| RacipeSE | Man page Source code |
| RacipeSE-class | Man page |
| annotation,RacipeSE-method | Man page |
| annotation<-,RacipeSE,ANY-method | Man page |
| configData | Man page |
| demoCircuit | Man page |
| densityPlot | Man page Source code |
| generateThresholds | Source code |
| getInteractions | Source code |
| sRACIPE | Man page |
| simulateGRCCpp | Source code |
| sracipeCircuit | Man page |
| sracipeCircuit,RacipeSE-method | Man page |
| sracipeCircuit-set | Man page |
| sracipeCircuit<- | Man page |
| sracipeCircuit<-,RacipeSE-method | Man page |
| sracipeConfig | Man page |
| sracipeConfig,RacipeSE-method | Man page |
| sracipeConfig-set | Man page |
| sracipeConfig<- | Man page |
| sracipeConfig<-,RacipeSE-method | Man page |
| sracipeGenParamNames | Man page Source code |
| sracipeGetTS | Man page |
| sracipeGetTS,RacipeSE-method | Man page |
| sracipeHeatmapSimilarity | Man page Source code |
| sracipeIC | Man page |
| sracipeIC,RacipeSE-method | Man page |
| sracipeIC-set | Man page |
| sracipeIC<- | Man page |
| sracipeIC<-,RacipeSE-method | Man page |
| sracipeKnockDown | Man page |
| sracipeKnockDown,RacipeSE-method | Man page |
| sracipeNormalize | Man page |
| sracipeNormalize,RacipeSE-method | Man page |
| sracipeOverExp | Man page |
| sracipeOverExp,RacipeSE-method | Man page |
| sracipeParams | Man page |
| sracipeParams,RacipeSE-method | Man page |
| sracipeParams-set | Man page |
| sracipeParams<- | Man page |
| sracipeParams<-,RacipeSE-method | Man page |
| sracipePlotCircuit | Man page |
| sracipePlotCircuit,RacipeSE-method | Man page |
| sracipePlotData | Man page |
| sracipePlotData,RacipeSE-method | Man page |
| sracipePlotParamBifur | Man page |
| sracipePlotParamBifur,RacipeSE-method | Man page |
| sracipeSimulate | Man page Source code |
