snapcount: R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts

snapcount is a client interface to the Snaptron webservices which support querying by gene name or genomic region. Results include raw expression counts derived from alignment of RNA-seq samples and/or various summarized measures of expression across one or more regions/genes per-sample (e.g. percent spliced in).

Package details

AuthorRone Charles
Bioconductor views Coverage DataImport GeneExpression RNASeq Sequencing Software
MaintainerRone Charles <>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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snapcount documentation built on Nov. 8, 2020, 4:53 p.m.