Scatterplot: ScatterplotHelpfile

In tRanslatome: Comparison between multiple levels of gene expression

Description

This plot shows each gene as dot uniquely determined by its log2 fold change at the first level (represented on the x-axis) and the fold change at the second level (represented on the y-axis).

Usage

Scatterplot(object, outputformat="on screen",track="")

Arguments

object	an object of class DEGs.
outputformat	a character string specifying if the plot is saved in jpeg (jpeg), postscript (postscript), pdf (pdf) format, or it is simply displayed on the screen(on screen). By default this value is on screen.
track	a character vector of gene names that will be explicitly highlighted in the scatterplot, if they match any gene contained in the object of class DEGs. By default this vector is empty.

Author(s)

Toma Tebaldi, Erik Dassi, Galena Kostoska

See Also

DEGs TranslatomeDataset computeDEGs

Examples

data(tRanslatomeSampleData)
Scatterplot(limma.DEGs, outputformat="on screen",track="")

tRanslatome documentation built on Nov. 8, 2020, 6:24 p.m.