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tests/testthat/test_tenXplore.R
In tenXplore: ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics
library(tenXplore)
context("ontology processing")
test_that("children compute", {
library(ontoProc)
efoOnto = getEFOOnto()
cc = children_TAG("EFO:0000324", efoOnto)
ss = secLevGen("B cell", efoOnto)
cl = slot(ss, "cleanFrame")
expect_true(class(ss) == "TermSet")
expect_true("mature B cell" %in% cl[,1])
})
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tenXplore documentation built on Nov. 8, 2020, 6:47 p.m.
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library(tenXplore)
context("ontology processing")
test_that("children compute", {
library(ontoProc)
efoOnto = getEFOOnto()
cc = children_TAG("EFO:0000324", efoOnto)
ss = secLevGen("B cell", efoOnto)
cl = slot(ss, "cleanFrame")
expect_true(class(ss) == "TermSet")
expect_true("mature B cell" %in% cl[,1])
})
Try the tenXplore package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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