Man pages for vidger
Create rapid visualizations of RNAseq data in R
| df.cuff | A 'cuffdiff' example dataset |
| df.deseq | A 'DESeq2' example dataset |
| df.edger | A 'edgeR' example dataset |
| vsBoxPlot | Box plot for log_{10}(FPKM or CPM) distributions |
| vsDEGMatrix | Differential gene expression matrix |
| vsFourWay | Four-Way plot for comparison of log fold changes in a... |
| vsMAMatrix | MA plot matrix from log_{2} fold changes and... |
| vsMAPlot | MA plot from mean expression and log fold changes from... |
| vsScatterMatrix | Scatter plot matrix of log_{10}(FPKM or CPM) values |
| vsScatterPlot | Scatter plot of log_{10}(FPKM or CPM) values |
| vsVolcano | Volcano plot from log_{2} fold changes and... |
| vsVolcanoMatrix | Volcano plot matrix from log_{2} fold changes and... |
