AMAP.Seq: Compare Gene Expressions from 2-Treatment RNA-Seq Experiments

An Approximated Most Average Powerful Test with Optimal FDR Control with Application to RNA-seq Data

AuthorYaqing Si
Date of publication2012-06-19 14:55:47
MaintainerYaqing Si <siyaqing@gmail.com>
LicenseGPL (>= 2)
Version1.0

View on CRAN

Functions

counts Man page
decom.initial Man page
del.true Man page
dispersion.nb.QL Man page
dispersion.nb.shrink Man page
dist.CvM2D Man page
est.mu.nb.mle Man page
est.v.nb.QL Man page
EXP.part.nbinom Man page
EXP.part.poisson Man page
EXP.step Man page
initial.uv Man page
int.nbinom.prior Man page
LogSum Man page
map-package Man page
MAX.step Man page
MGN.EM Man page
nb.lglk Man page
Norm.GMedian Man page
pdf2cdf Man page
pdf2grid Man page
posterior.uv Man page
posterior.uv.one Man page
prior.est Man page
prior.grid Man page
RNASeq.Data Man page
RNASeq.Data.Gene Man page
test.AMAP Man page
test.amap.as Man page
test.amap.gene Man page

Files

AMAP.Seq
AMAP.Seq/MD5
AMAP.Seq/R
AMAP.Seq/R/test-amap.r
AMAP.Seq/R/data.r
AMAP.Seq/R/prior-est.r
AMAP.Seq/R/prior-MGN.r
AMAP.Seq/R/post-prob.r
AMAP.Seq/NAMESPACE
AMAP.Seq/data
AMAP.Seq/data/SimuHapMap.RData
AMAP.Seq/DESCRIPTION
AMAP.Seq/man
AMAP.Seq/man/MGN.EM.Rd AMAP.Seq/man/test.AMAP.Rd AMAP.Seq/man/RNASeq.Data.Rd AMAP.Seq/man/AMAP.Seq.Internal.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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