AMAP.Seq: Compare Gene Expressions from 2-Treatment RNA-Seq Experiments

An Approximated Most Average Powerful Test with Optimal FDR Control with Application to RNA-seq Data

Author
Yaqing Si
Date of publication
2012-06-19 14:55:47
Maintainer
Yaqing Si <siyaqing@gmail.com>
License
GPL (>= 2)
Version
1.0

View on CRAN

Man pages

AMAP.Seq.Internal
Internal functions/data for AMAP.Seq package
MGN.EM
Estimate the mixture gamma-normal (MGN) distribution using...
RNASeq.Data
Standardize the data from RNA-seq experiment
test.AMAP
Calculate the test statistics of the AMAP tests

Files in this package

AMAP.Seq
AMAP.Seq/MD5
AMAP.Seq/R
AMAP.Seq/R/test-amap.r
AMAP.Seq/R/data.r
AMAP.Seq/R/prior-est.r
AMAP.Seq/R/prior-MGN.r
AMAP.Seq/R/post-prob.r
AMAP.Seq/NAMESPACE
AMAP.Seq/data
AMAP.Seq/data/SimuHapMap.RData
AMAP.Seq/DESCRIPTION
AMAP.Seq/man
AMAP.Seq/man/MGN.EM.Rd
AMAP.Seq/man/test.AMAP.Rd
AMAP.Seq/man/RNASeq.Data.Rd
AMAP.Seq/man/AMAP.Seq.Internal.Rd