Man pages for ASMap
Linkage Map Construction using the MSTmap Algorithm
| alignCross | Graphical linkage group identity and alignment. |
| ASMap-internal | Internal fastMap functions |
| ASMap-package | Additional functions for linkage map construction and... |
| breakCross | Break linkage groups of an 'qtl' cross object |
| combineMap | Combine linkage maps from multiple 'qtl' cross objects |
| fixClones | Consensus genotypes for clonal genotype groups |
| genClones | Find and report genotype clones |
| heatMap | Heat map of the estimated pairwise recombination fractions... |
| mapBC | A constructed linkage map for a backcross barley population |
| mapBCu | An unconstructed marker set for a backcross barley population |
| mapDH | A constructed linkage map for a doubled haploid wheat... |
| mapDHf | An unconstructed marker set for a doubled haploid wheat... |
| mapF2 | Simulated constructed linkage map for a self pollinated F2... |
| mergeCross | Merge linkage groups of an 'qtl' cross object |
| mstmap.cross | Extremely fast linkage map construction for 'qtl' objects... |
| mstmap.data.frame | Extremely fast linkage map construction for data frame... |
| pp.init | Parameter initialization function |
| profileGen | Profile individual genotype statistics for an R/qtl cross... |
| profileMark | Profile individual marker and interval statistics for an... |
| pullCross | Pull markers from a linkage map. |
| pushCross | Push markers into an established R/qtl linkage map. |
| pValue | P-value graph |
| quickEst | Very quick estimation of genetic map distances. |
| statGen | Individual genotype statistics for an R/qtl cross object |
| statMark | Individual marker and interval statistics for an R/qtl cross... |
| subsetCross | Subset an R/qtl object |
