dot-heat_kinship: Kinship heatmaps (adapted from superheat)

In ASRgenomics: Complementary Genomic Functions

Kinship heatmaps (adapted from superheat)

Description

Implements a subset of superheat behavior used by kinship.heatmap().

Usage

.heat_kinship(
  K,
  dendrogram = TRUE,
  clustering.method = c("hierarchical", "kmeans"),
  dist.method = c("euclidean", "maximum", "manhattan", "canberra", "binary", "minkowski"),
  row.label = TRUE,
  col.label = FALSE
)

Arguments

K	A numeric matrix.
dendrogram	Logical. Draw a column dendrogram.
clustering.method	Clustering method. Supports "hierarchical" and "kmeans".
dist.method	Distance method passed to dist().
row.label	Logical. Draw row labels.
col.label	Logical. Draw column labels.

Details

Credits to the superheat package by Barter and Yu (2020).

Value

Invisibly returns a list, with plot, membership.cols, membership.rows, order.rows, order.cols, and heat.pal.values.

ASRgenomics documentation built on May 13, 2026, 1:07 a.m.