site.f: Sampling Site Short Names
In AmpliconDuo: Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
Description
Usage
Format
References
Examples
Description
Character vector with the names of the sampling sites, corresponding to
the names used to denote amplicon frequencies in
the ampliconfreqs data.
Usage
1
Format
The format is:
chr [1:8] "FU25" "FU28" "FU31.1" "FU31.2" "FU34" "FU37" "UniPond" "BogSoil"
References
Boenigk J, Heider D, Jost S, Lange A, Budeus B, Schilling E,
Strittmatter A, Hoffmann D: A high-throughput amplicon sequencing and
analysis protocol for comparative analyses of microbial communities
(submitted)
Examples
1
2
3
data(site.f)
data(ampliconfreqs)
ampliconduo(ampliconfreqs[,1:6], sample.names = site.f[1:3])
AmpliconDuo documentation built on July 1, 2020, 10:21 p.m.
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Description Usage Format References Examples
Description
Character vector with the names of the sampling sites, corresponding to
the names used to denote amplicon frequencies in
the ampliconfreqs data.
Usage
1 |
Format
The format is: chr [1:8] "FU25" "FU28" "FU31.1" "FU31.2" "FU34" "FU37" "UniPond" "BogSoil"
References
Boenigk J, Heider D, Jost S, Lange A, Budeus B, Schilling E, Strittmatter A, Hoffmann D: A high-throughput amplicon sequencing and analysis protocol for comparative analyses of microbial communities (submitted)
Examples
1 2 3 | data(site.f)
data(ampliconfreqs)
ampliconduo(ampliconfreqs[,1:6], sample.names = site.f[1:3])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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