annot: Data extraction function.

In AnnotLists: AnnotLists: A tool to annotate multiple lists from a specific annotation file.

Description

Annotate multiple lists from a specific annotation file.

Usage

annot(annot_file="", data_dir="", res_path="", display=TRUE)

Arguments

annot_file	Path for the annotations file.
data_dir	Path of the folder where are placed the lists.
res_path	Path of the resulting annotated lists.
display	If informations could be displayed during the process.

Value

The resulting annotated lists are placed in a folder named "AnnotLists_" in the working directory. Thelists will be named: "Annot_" + lists names. If a list could not be fully annotated a file - "Rest_" + lists names - with the renmaining unannotated identifers will be created. The percentage of annotated identifier for each list is displayed during the process.

Author(s)

Nicolas Cagnard

References

http://www.mrbioinfo.com

AnnotLists documentation built on May 1, 2019, 7:49 p.m.