AntibodyTiters-package: Antibody Titer Analysis of Vaccinated Patients.

AntibodyTiters-packageR Documentation

Antibody Titer Analysis of Vaccinated Patients.

Description

Visualization of antibody titer scores is valuable for examination of vaccination effects. AntibodyTiters visualizes antibody titers of all or selected patients. This package also produces empty excel files in a specified format, in which users can fill in experimental data for visualization. Excel files with toy data can also be produced, so that users can see how it is visualized before obtaining real data. The data should contain titer scores at pre-vaccination, after-1st shot, after-2nd shot, and at least one additional sampling points. Patients with missing values can be included. The first two sampling points (pre-vaccination and after-1st shot) will be plotted discretely, whereas those following will be plotted on a continuous time scale that starts from the day of second shot. Half-life of titer can also be calculated for each pair of sampling points.

Details

Package: AntibodyTiters
Type: Package
Version: 0.1.24
Date: 2022-05-24
License: GPL-3

emptyABT: Production of an empty xlsx file in which experimental results should be recorded.

groupAttribABT: Addition of a new attribute that categorizes patients in specified groups to an ABT class object.

idABT: Extracting patient IDs from an ABT class object.

plotAllABT: Plotting antibody titers of All patients.

plotEachABT: Plotting antibody titers of each patient.

readABT: Reading an xlsx file and examining the validity of the dataset.

halfLifeABT: Calculating half-life from an ABT class object.

toyABT: Production of an xlsx file with toy data.

Author(s)

Yuuki Mizumoto, Hiroaki Kato, Takeshi Urano
Maintainer: Hiroaki Kato <hkato@med.shimane-u.ac.jp>


AntibodyTiters documentation built on May 24, 2022, 5:05 p.m.