BIOM.utils: Utilities for the BIOM (Biological Observation Matrix) Format

Share:

Provides utilities to facilitate import, export and computation with the BIOM (Biological Observation Matrix) format (http://biom-format.org).

Author
Daniel T. Braithwaite [aut, cre]
Date of publication
2014-08-29 01:18:59
Maintainer
Daniel T. Braithwaite <contact.dtb@gmail.com>
License
BSD_2_clause + file LICENSE
Version
0.9
URLs

View on CRAN

Man pages

BIOMconstants
Constants related to BIOM format
BIOMdimensions
Row and column information of BIOM data
BIOMdisplay
Display BIOM data in full or part
BIOMexamples
BIOM examples and related utilities
BIOMfrom
Convert BIOM data from formal to basic type (export)
BIOMto
Attach formal type to BIOM data (import)
SimpleMatrixReshaping
Convert matrix data between dense, sparse, and list...

Files in this package

BIOM.utils
BIOM.utils/inst
BIOM.utils/inst/extdata
BIOM.utils/inst/extdata/example-json.txt
BIOM.utils/tests
BIOM.utils/tests/tests.R
BIOM.utils/NAMESPACE
BIOM.utils/data
BIOM.utils/data/examples.rda
BIOM.utils/data/data.rda
BIOM.utils/R
BIOM.utils/R/sysdata.rda
BIOM.utils/R/source.R
BIOM.utils/README.md
BIOM.utils/MD5
BIOM.utils/DESCRIPTION
BIOM.utils/man
BIOM.utils/man/BIOMexamples.Rd
BIOM.utils/man/SimpleMatrixReshaping.Rd
BIOM.utils/man/BIOMdimensions.Rd
BIOM.utils/man/BIOMto.Rd
BIOM.utils/man/BIOMdisplay.Rd
BIOM.utils/man/BIOMfrom.Rd
BIOM.utils/man/BIOMconstants.Rd
BIOM.utils/LICENSE