Man pages for BMhyd
PCM for Hybridization
| AdaptiveConfidenceIntervalSampling | Confidence interval under adaptive cluster sampling technique |
| AdjustForDet | Adjust the phylogeny |
| AICc | AICc |
| AkaikeWeight | Akaike weight |
| AttachHybridsToDonor | Attach hybrids to the donor species |
| bmhyd | Comparative method for studying hyridization using Brownian... |
| CalculateLikelihood | Calculate the likelihood value for the model |
| cichlid | Cichlid data from Kobmuller et al. 2007 |
| ContourFromAdaptiveSampling | Contour maps |
| DetPass | determinant of the matrix |
| GenerateValues | Generate parameter values |
| GetAncestor | Identify the ancestor |
| GetClade | Get clade from the tree |
| GetMeansModified | The species means for the network model |
| GetVModified | Variance covariance matrix for the network model |
| LumpIntoClades | Lump into clades |
| nicotiana | nicotiana data |
| Plot_ConvexHull | Convex hull |
| PlotNetwork | Phylogenetic Network Plot |
| SimulateNetwork | Simulate phylogenetic network |
| SimulateTipData | Simulate data on a network |
