API for BatchJobs
Batch Computing with R
| Global functions | |
|---|---|
| .BatchJobs.R | Man page |
| .onAttach | Source code |
| .onLoad | Source code |
| BatchJobs | Man page |
| ClusterFunctions | Man page |
| Job | Man page |
| Registry | Man page |
| SSHWorker | Man page |
| SubmitJobResult | Man page |
| addIntModulo | Source code |
| addRegistryPackages | Man page Source code |
| addRegistrySourceDirs | Man page Source code |
| addRegistrySourceFiles | Man page Source code |
| adjustRegistryPaths | Source code |
| applyJobFunction | Man page Source code |
| applyJobFunction.Registry | Source code |
| assignConf | Source code |
| batchApply | Source code |
| batchApplyWrapper | Source code |
| batchExpandGrid | Man page Source code |
| batchExport | Man page Source code |
| batchMap | Man page Source code |
| batchMapQuick | Man page Source code |
| batchMapResults | Man page Source code |
| batchMapResultsWrapper | Source code |
| batchQuery | Man page Source code |
| batchReduce | Man page Source code |
| batchReduceResults | Man page Source code |
| batchReduceResultsWrapper | Source code |
| batchReduceWrapper | Source code |
| batchUnexport | Man page Source code |
| buffer | Source code |
| callFunctionOnSSHWorkers | Man page Source code |
| cfBrewTemplate | Man page Source code |
| cfHandleUnknownSubmitError | Man page Source code |
| cfKillBatchJob | Man page Source code |
| cfReadBrewTemplate | Man page Source code |
| checkConf | Source code |
| checkConfElements | Source code |
| checkDir | Source code |
| checkDirs | Source code |
| checkIdValid | Source code |
| checkIds | Man page Source code |
| checkMoreArgs | Source code |
| checkPart | Source code |
| checkRegistry | Source code |
| checkUserFunction | Source code |
| configuration | Man page |
| convertUseNames | Source code |
| copyRequiredJobFiles | Man page Source code |
| copyRequiredJobFiles.Registry | Source code |
| createShardedDirs | Source code |
| dbAddData | Source code |
| dbCheckJobIds | Source code |
| dbConnectToJobsDB | Source code |
| dbConvertNumericToPOSIXct | Source code |
| dbCreateExpandedJobsView | Source code |
| dbCreateJobDefTable | Man page Source code |
| dbCreateJobDefTable.Registry | Source code |
| dbCreateJobStatusTable | Source code |
| dbDoQueries | Source code |
| dbDoQuery | Source code |
| dbFindDisappeared | Source code |
| dbFindDone | Source code |
| dbFindErrors | Source code |
| dbFindExpiredJobs | Source code |
| dbFindOnSystem | Source code |
| dbFindRunning | Source code |
| dbFindStarted | Source code |
| dbFindSubmitted | Source code |
| dbFindSubmittedNotTerminated | Source code |
| dbFindTerminated | Source code |
| dbGetConnection | Source code |
| dbGetConnection.SQLiteDriver | Source code |
| dbGetErrorMsgs | Source code |
| dbGetExpandedJobsTable | Source code |
| dbGetFirstJobInChunkIds | Source code |
| dbGetJobCount | Source code |
| dbGetJobId | Source code |
| dbGetJobIds | Source code |
| dbGetJobIdsIfAllDone | Source code |
| dbGetJobNames | Source code |
| dbGetJobStatusTable | Source code |
| dbGetJobs | Man page Source code |
| dbGetJobs.Registry | Source code |
| dbGetLastAddedIds | Source code |
| dbGetStats | Source code |
| dbMakeMessageDone | Source code |
| dbMakeMessageError | Source code |
| dbMakeMessageKilled | Source code |
| dbMakeMessageStarted | Source code |
| dbMakeMessageSubmitted | Source code |
| dbMatchJobNames | Source code |
| dbRemoveJobs | Source code |
| dbSelectWithIds | Source code |
| dbSendMessage | Source code |
| dbSendMessages | Source code |
| dbSetJobFunction | Source code |
| dbSetJobNames | Source code |
| debugMulticore | Man page Source code |
| debugSSH | Man page Source code |
| deserialize | Source code |
| doJob | Source code |
| fileExists | Source code |
| filterResults | Man page Source code |
| findConfigs | Source code |
| findDisappeared | Man page Source code |
| findDone | Man page Source code |
| findErrors | Man page Source code |
| findExpired | Man page Source code |
| findHelperScriptLinux | Source code |
| findJobs | Man page Source code |
| findMissingResults | Man page Source code |
| findNotDone | Man page Source code |
| findNotErrors | Man page Source code |
| findNotOnSystem | Man page Source code |
| findNotRunning | Man page Source code |
| findNotStarted | Man page Source code |
| findNotSubmitted | Man page Source code |
| findNotTerminated | Man page Source code |
| findOnSystem | Man page Source code |
| findRunning | Man page Source code |
| findStarted | Man page Source code |
| findState | Source code |
| findSubmitted | Man page Source code |
| findTerminated | Man page Source code |
| findWorker | Source code |
| getArgNames | Source code |
| getBatchIds | Source code |
| getBatchJobsConf | Source code |
| getClusterFunctions | Source code |
| getConfFilePath | Source code |
| getConfNames | Source code |
| getConfig | Man page Source code |
| getErrorMessages | Man page Source code |
| getExportDir | Source code |
| getFilePaths | Source code |
| getFunDir | Source code |
| getFunFilePath | Source code |
| getJob | Man page Source code |
| getJobDirs | Source code |
| getJobFile | Source code |
| getJobIds | Man page Source code |
| getJobInfo | Man page Source code |
| getJobInfo.Registry | Source code |
| getJobInfoInternal | Source code |
| getJobLocation | Man page Source code |
| getJobNr | Man page Source code |
| getJobParamDf | Man page Source code |
| getJobParentDir | Source code |
| getJobResources | Man page Source code |
| getJobs | Man page Source code |
| getJobs.Registry | Source code |
| getKillJob | Source code |
| getListJobs | Source code |
| getLogFilePath | Source code |
| getLogFiles | Man page Source code |
| getPendingDir | Source code |
| getPendingFile | Source code |
| getProgressBar | Source code |
| getRScriptFilePath | Source code |
| getRScripts | Source code |
| getRandomSeed | Source code |
| getRegistryFilePath | Source code |
| getResources | Man page Source code |
| getResourcesDir | Source code |
| getResourcesFilePath | Source code |
| getResult | Source code |
| getResultFilePath | Source code |
| getResults | Source code |
| getSSHWorkersInfo | Man page Source code |
| getStatus | Man page Source code |
| getWorkerNumberOfCPUs | Source code |
| getWorkerNumberOfCPUs.WorkerLinux | Source code |
| getWorkerSchedulerStatus | Source code |
| getWorkerStatus | Source code |
| getWorkerStatus.WorkerLinux | Source code |
| grepLogs | Man page Source code |
| info | Source code |
| installPackagesOnSSHWorkers | Man page Source code |
| is.accessible | Source code |
| isOnSlave | Source code |
| isPathFromRoot | Source code |
| isRegistryDir | Source code |
| killJobs | Man page Source code |
| killWorkerJob | Source code |
| killWorkerJob.WorkerLinux | Source code |
| listWorkerJobs | Source code |
| listWorkerJobs.WorkerLinux | Source code |
| loadConf | Source code |
| loadConfig | Man page Source code |
| loadExports | Man page Source code |
| loadRegistry | Man page Source code |
| loadResult | Man page Source code |
| loadResults | Man page Source code |
| makeClusterFunctions | Man page Source code |
| makeClusterFunctionsInteractive | Man page Source code |
| makeClusterFunctionsLSF | Man page Source code |
| makeClusterFunctionsLocal | Man page Source code |
| makeClusterFunctionsMulticore | Man page Source code |
| makeClusterFunctionsOpenLava | Man page Source code |
| makeClusterFunctionsSGE | Man page Source code |
| makeClusterFunctionsSLURM | Man page Source code |
| makeClusterFunctionsSSH | Man page Source code |
| makeClusterFunctionsTorque | Man page Source code |
| makeJob | Man page Source code |
| makeRegistry | Man page Source code |
| makeRegistryInternal | Source code |
| makeSSHWorker | Man page Source code |
| makeSubmitJobResult | Man page Source code |
| makeWorker | Source code |
| makeWorkerLocalLinux | Source code |
| makeWorkerRemoteLinux | Source code |
| now | Source code |
| print.ClusterFunctions | Source code |
| print.Config | Source code |
| print.Job | Source code |
| print.Registry | Source code |
| print.SubmitJobResult | Source code |
| printableConf | Source code |
| readConfs | Source code |
| readSQLFile | Source code |
| reduceResults | Man page Source code |
| reduceResultsDataFrame | Man page Source code |
| reduceResultsDataTable | Man page Source code |
| reduceResultsList | Man page Source code |
| reduceResultsMatrix | Man page Source code |
| reduceResultsVector | Man page Source code |
| removeDirs | Source code |
| removeRegistry | Man page Source code |
| removeRegistryPackages | Man page Source code |
| removeRegistrySourceDirs | Man page Source code |
| removeRegistrySourceFiles | Man page Source code |
| resetJobs | Man page Source code |
| resrc | Source code |
| runOSCommandLinux | Source code |
| runWorkerCommand | Source code |
| sanitizePath | Man page Source code |
| saveConf | Source code |
| saveFunction | Source code |
| saveRegistry | Source code |
| saveResources | Source code |
| seeder | Source code |
| sendMail | Source code |
| setConfig | Man page Source code |
| setJobFunction | Man page Source code |
| setJobFunction.Registry | Source code |
| setJobNames | Man page Source code |
| setOnSlave | Source code |
| setRegistryPackages | Man page Source code |
| showClusterStatus | Man page Source code |
| showLog | Man page Source code |
| showStatus | Man page Source code |
| sourceConfFile | Source code |
| sourceConfFiles | Source code |
| sourceRegistryFiles | Man page Source code |
| sourceRegistryFilesInternal | Source code |
| sqlQuote | Source code |
| startWorkerJob | Source code |
| startWorkerJob.WorkerLinux | Source code |
| submitJobs | Man page Source code |
| sweepRegistry | Man page Source code |
| switchWd | Source code |
| syncRegistry | Man page Source code |
| testJob | Man page Source code |
| updateRegistry | Man page Source code |
| updateRegistry.Registry | Source code |
| updateWorker | Source code |
| useStagedQueries | Source code |
| waitForFiles | Source code |
| waitForJobs | Man page Source code |
| writeFiles | Source code |
| writeSQLFile | Source code |
