API for BatchJobs
Batch Computing with R

Global functions
.BatchJobs.R Man page
.onAttach Source code
.onLoad Source code
BatchJobs Man page
ClusterFunctions Man page
Job Man page
Registry Man page
SSHWorker Man page
SubmitJobResult Man page
addIntModulo Source code
addRegistryPackages Man page Source code
addRegistrySourceDirs Man page Source code
addRegistrySourceFiles Man page Source code
adjustRegistryPaths Source code
applyJobFunction Man page Source code
applyJobFunction.Registry Source code
assignConf Source code
batchApply Source code
batchApplyWrapper Source code
batchExpandGrid Man page Source code
batchExport Man page Source code
batchMap Man page Source code
batchMapQuick Man page Source code
batchMapResults Man page Source code
batchMapResultsWrapper Source code
batchQuery Man page Source code
batchReduce Man page Source code
batchReduceResults Man page Source code
batchReduceResultsWrapper Source code
batchReduceWrapper Source code
batchUnexport Man page Source code
buffer Source code
callFunctionOnSSHWorkers Man page Source code
cfBrewTemplate Man page Source code
cfHandleUnknownSubmitError Man page Source code
cfKillBatchJob Man page Source code
cfReadBrewTemplate Man page Source code
checkConf Source code
checkConfElements Source code
checkDir Source code
checkDirs Source code
checkIdValid Source code
checkIds Man page Source code
checkMoreArgs Source code
checkPart Source code
checkRegistry Source code
checkUserFunction Source code
configuration Man page
convertUseNames Source code
copyRequiredJobFiles Man page Source code
copyRequiredJobFiles.Registry Source code
createShardedDirs Source code
dbAddData Source code
dbCheckJobIds Source code
dbConnectToJobsDB Source code
dbConvertNumericToPOSIXct Source code
dbCreateExpandedJobsView Source code
dbCreateJobDefTable Man page Source code
dbCreateJobDefTable.Registry Source code
dbCreateJobStatusTable Source code
dbDoQueries Source code
dbDoQuery Source code
dbFindDisappeared Source code
dbFindDone Source code
dbFindErrors Source code
dbFindExpiredJobs Source code
dbFindOnSystem Source code
dbFindRunning Source code
dbFindStarted Source code
dbFindSubmitted Source code
dbFindSubmittedNotTerminated Source code
dbFindTerminated Source code
dbGetConnection Source code
dbGetConnection.SQLiteDriver Source code
dbGetErrorMsgs Source code
dbGetExpandedJobsTable Source code
dbGetFirstJobInChunkIds Source code
dbGetJobCount Source code
dbGetJobId Source code
dbGetJobIds Source code
dbGetJobIdsIfAllDone Source code
dbGetJobNames Source code
dbGetJobStatusTable Source code
dbGetJobs Man page Source code
dbGetJobs.Registry Source code
dbGetLastAddedIds Source code
dbGetStats Source code
dbMakeMessageDone Source code
dbMakeMessageError Source code
dbMakeMessageKilled Source code
dbMakeMessageStarted Source code
dbMakeMessageSubmitted Source code
dbMatchJobNames Source code
dbRemoveJobs Source code
dbSelectWithIds Source code
dbSendMessage Source code
dbSendMessages Source code
dbSetJobFunction Source code
dbSetJobNames Source code
debugMulticore Man page Source code
debugSSH Man page Source code
deserialize Source code
doJob Source code
fileExists Source code
filterResults Man page Source code
findConfigs Source code
findDisappeared Man page Source code
findDone Man page Source code
findErrors Man page Source code
findExpired Man page Source code
findHelperScriptLinux Source code
findJobs Man page Source code
findMissingResults Man page Source code
findNotDone Man page Source code
findNotErrors Man page Source code
findNotOnSystem Man page Source code
findNotRunning Man page Source code
findNotStarted Man page Source code
findNotSubmitted Man page Source code
findNotTerminated Man page Source code
findOnSystem Man page Source code
findRunning Man page Source code
findStarted Man page Source code
findState Source code
findSubmitted Man page Source code
findTerminated Man page Source code
findWorker Source code
getArgNames Source code
getBatchIds Source code
getBatchJobsConf Source code
getClusterFunctions Source code
getConfFilePath Source code
getConfNames Source code
getConfig Man page Source code
getErrorMessages Man page Source code
getExportDir Source code
getFilePaths Source code
getFunDir Source code
getFunFilePath Source code
getJob Man page Source code
getJobDirs Source code
getJobFile Source code
getJobIds Man page Source code
getJobInfo Man page Source code
getJobInfo.Registry Source code
getJobInfoInternal Source code
getJobLocation Man page Source code
getJobNr Man page Source code
getJobParamDf Man page Source code
getJobParentDir Source code
getJobResources Man page Source code
getJobs Man page Source code
getJobs.Registry Source code
getKillJob Source code
getListJobs Source code
getLogFilePath Source code
getLogFiles Man page Source code
getPendingDir Source code
getPendingFile Source code
getProgressBar Source code
getRScriptFilePath Source code
getRScripts Source code
getRandomSeed Source code
getRegistryFilePath Source code
getResources Man page Source code
getResourcesDir Source code
getResourcesFilePath Source code
getResult Source code
getResultFilePath Source code
getResults Source code
getSSHWorkersInfo Man page Source code
getStatus Man page Source code
getWorkerNumberOfCPUs Source code
getWorkerNumberOfCPUs.WorkerLinux Source code
getWorkerSchedulerStatus Source code
getWorkerStatus Source code
getWorkerStatus.WorkerLinux Source code
grepLogs Man page Source code
info Source code
installPackagesOnSSHWorkers Man page Source code
is.accessible Source code
isOnSlave Source code
isPathFromRoot Source code
isRegistryDir Source code
killJobs Man page Source code
killWorkerJob Source code
killWorkerJob.WorkerLinux Source code
listWorkerJobs Source code
listWorkerJobs.WorkerLinux Source code
loadConf Source code
loadConfig Man page Source code
loadExports Man page Source code
loadRegistry Man page Source code
loadResult Man page Source code
loadResults Man page Source code
makeClusterFunctions Man page Source code
makeClusterFunctionsInteractive Man page Source code
makeClusterFunctionsLSF Man page Source code
makeClusterFunctionsLocal Man page Source code
makeClusterFunctionsMulticore Man page Source code
makeClusterFunctionsOpenLava Man page Source code
makeClusterFunctionsSGE Man page Source code
makeClusterFunctionsSLURM Man page Source code
makeClusterFunctionsSSH Man page Source code
makeClusterFunctionsTorque Man page Source code
makeJob Man page Source code
makeRegistry Man page Source code
makeRegistryInternal Source code
makeSSHWorker Man page Source code
makeSubmitJobResult Man page Source code
makeWorker Source code
makeWorkerLocalLinux Source code
makeWorkerRemoteLinux Source code
now Source code
print.ClusterFunctions Source code
print.Config Source code
print.Job Source code
print.Registry Source code
print.SubmitJobResult Source code
printableConf Source code
readConfs Source code
readSQLFile Source code
reduceResults Man page Source code
reduceResultsDataFrame Man page Source code
reduceResultsDataTable Man page Source code
reduceResultsList Man page Source code
reduceResultsMatrix Man page Source code
reduceResultsVector Man page Source code
removeDirs Source code
removeRegistry Man page Source code
removeRegistryPackages Man page Source code
removeRegistrySourceDirs Man page Source code
removeRegistrySourceFiles Man page Source code
resetJobs Man page Source code
resrc Source code
runOSCommandLinux Source code
runWorkerCommand Source code
sanitizePath Man page Source code
saveConf Source code
saveFunction Source code
saveRegistry Source code
saveResources Source code
seeder Source code
sendMail Source code
setConfig Man page Source code
setJobFunction Man page Source code
setJobFunction.Registry Source code
setJobNames Man page Source code
setOnSlave Source code
setRegistryPackages Man page Source code
showClusterStatus Man page Source code
showLog Man page Source code
showStatus Man page Source code
sourceConfFile Source code
sourceConfFiles Source code
sourceRegistryFiles Man page Source code
sourceRegistryFilesInternal Source code
sqlQuote Source code
startWorkerJob Source code
startWorkerJob.WorkerLinux Source code
submitJobs Man page Source code
sweepRegistry Man page Source code
switchWd Source code
syncRegistry Man page Source code
testJob Man page Source code
updateRegistry Man page Source code
updateRegistry.Registry Source code
updateWorker Source code
useStagedQueries Source code
waitForFiles Source code
waitForJobs Man page Source code
writeFiles Source code
writeSQLFile Source code
BatchJobs documentation built on March 21, 2022, 5:05 p.m.