plotTrace: Plot Trace Histories

In BayHap: Bayesian analysis of haplotype association using Markov Chain Monte Carlo

Description

Displays the trace histories for the specified parameter(s).

Usage

plotTrace(haplo.object, all = TRUE, name.var = " ", 
          keep.rares.trace = FALSE)

Arguments

haplo.object	An object of class reg or freq.
all	Logical. The default value TRUE implies to plot the trace for all the parameters. If FALSE, the vector of names of the desired parameters to plot must be specified in name.var.
name.var	If all=FALSE, specify here a vector containing the names of the chosen parameters to plot their trace.
keep.rares.trace	Logical. Indicates if the trace for rare category must be shown.

Value

Graphs of trace histories.

Author(s)

Original version by Brian J. Smith in package Boa.

Adapted version by Raquel Iniesta [e-mail]

BayHap documentation built on May 2, 2019, 12:44 a.m.