summary.bayescomm: Summarise bayescomm parameter chains

In BayesComm: Bayesian Community Ecology Analysis

Description

summary.bayescomm creates summaries of a subset of the parameter chains in a bayescomm object using the coda package.

Usage

## S3 method for class 'bayescomm'
summary(object, chain, ...)

Arguments

object	a bayescomm object
chain	a character string of the parameter chains to plot
...	further arguments to pass to summary.mcmc

Details

chain should be one of 'R' (for correlation coefficients) or 'B$sp' where sp is the species of interest (for regression coefficients).

See Also

BC, summary.mcmc

Examples

m1 <- example(BC)[[1]]
summary(m1, 'R')
summary(m1, 'B$sp1')

BayesComm documentation built on May 2, 2019, 1:43 p.m.