View source: R/low_rank_multivariate_normal.R
| bf.dist.low_rank_multivariate_normal | R Documentation |
The *Low-Rank Multivariate Normal* (LRMVN) distribution is a parameterizaton of the multivariate normal distribution where the covariance matrix is expressed as a low-rank plus diagonal decomposition:
\Sigma = F F^\top + D
where $F$ is a low-rank matrix (capturing correlations) and $D$ is a diagonal matrix (capturing independent noise). This representation is often used in probabilistic modeling and variational inference to efficiently handle high-dimensional Gaussian distributions with structured covariance.
bf.dist.low_rank_multivariate_normal(
loc,
cov_factor,
cov_diag,
validate_args = py_none(),
name = "x",
obs = py_none(),
mask = py_none(),
sample = FALSE,
seed = py_none(),
shape = c(),
event = 0,
create_obj = FALSE,
to_jax = TRUE
)
loc |
A numeric vector representing the mean vector. |
cov_factor |
A numeric vector or matrix used to construct the covariance matrix. |
cov_diag |
A numeric vector representing the diagonal elements of the covariance matrix. |
validate_args |
Logical: Whether to validate parameter values. Defaults to 'reticulate::py_none()'. |
name |
A character string representing the name of the random variable within a model. This is used to uniquely identify the variable. Defaults to 'x'. |
obs |
A numeric vector or array of observed values. If provided, the random variable is conditioned on these values. If 'NULL', the variable is treated as a latent (unobserved) variable. Defaults to 'NULL'. |
mask |
Logical vector. Optional boolean array to mask observations. |
sample |
A logical value that controls the function's behavior. If 'TRUE', the function will directly draw samples from the distribution. If 'FALSE', it will create a random variable within a model. Defaults to 'FALSE'. |
seed |
An integer used to set the random seed for reproducibility when 'sample = TRUE'. This argument has no effect when 'sample = FALSE', as randomness is handled by the model's inference engine. Defaults to 0. |
shape |
Numeric vector. A multi-purpose argument for shaping. When ‘sample=False' (model building), this is used with '.expand(shape)' to set the distribution’s batch shape. When 'sample=True' (direct sampling), this is used as 'sample_shape' to draw a raw JAX array of the given shape. |
event |
Integer. The number of batch dimensions to reinterpret as event dimensions (used in model building). |
create_obj |
Logical. If True, returns the raw BI distribution object instead of creating a sample site. This is essential for building complex distributions like 'MixtureSameFamily'. |
to_jax |
Boolean. Indicates whether to return a JAX array or not. |
- When sample=FALSE, a BI Low Rank Multivariate Normal distribution object (for model building).
- When sample=TRUE, a JAX array of samples drawn from the Low Rank Multivariate Normal distribution (for direct sampling).
- When create_obj=TRUE, the raw BI distribution object (for advanced use cases).
This is a wrapper of https://num.pyro.ai/en/stable/distributions.html#lowrankmultivariatenormal
library(BayesForge)
m=importBF(platform='cpu')
event_size = 10
rank = 5
bf.dist.low_rank_multivariate_normal(
loc = bf.dist.normal(0,1,shape = c(event_size), sample = TRUE)*2,
cov_factor = bf.dist.normal(0,1,shape = c(event_size, rank), sample = TRUE),
cov_diag = bf.dist.normal(10,0.5,shape = c(event_size), sample = TRUE),
sample = TRUE)
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