posterior: A posterior with parameter "delta_mu"

In BayesVolcano: Creating Volcano Plots from Bayesian Model Posteriors

A posterior with parameter "delta_mu"

Description

A data frame with 98 columns (each indicating posterior samples of the paramter "delta_mu" of one biological entity like e.g. a metabolite) and 1000 rows (the number of total samples (chains*iterations)) of the Bayesian model.

Usage

data("posterior")

Format

A data frame with 98 columns (each indicating posterior samples of the paramter "delta_mu" of one biological entity like e.g. a metabolite) and 1000 rows (the number of total samples (chains*iterations)) of the Bayesian model.

Source

Script used to create simulated data #BiocManager::install("MetaboDynamics") library(MetaboDynamics) data("longitudinalMetabolomics_df") fit_dynamics_model(data=longitudinalMetabolomics_df) posterior <- as.data.frame(rstan::extract(fit,pars="euclidean_distance"))

library(stringr) cols <- colnames(posterior)[str_detect(pattern = ".1.2",string=colnames(posterior))] posterior <- posterior[,cols] posterior <- posterior[,-c(1:10,109:118)]

BayesVolcano documentation built on March 31, 2026, 5:06 p.m.