Bclim: Bayesian Palaeoclimate Reconstruction from Pollen Data
Version 3.1.2

Takes pollen and chronology data from lake cores and produces a Bayesian posterior distribution of palaeoclimate from that location after fitting a non-linear non-Gaussian state-space model. For more details see the paper Parnell et al. (2015), Bayesian inference for palaeoclimate with time uncertainty and stochastic volatility. Journal of the Royal Statistical Society: Series C (Applied Statistics), 64: 115–138 .

AuthorAndrew Parnell [cre], James Sweeney [aut], Thinh Doan [aut]
Date of publication2016-12-27 15:31:09
MaintainerAndrew Parnell <andrew.parnell@ucd.ie>
LicenseGPL (>= 2)
Version3.1.2
URL https://github.com/andrewcparnell/Bclim
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("Bclim")

Getting started

Bayesian Palaeoclimate Reconstruction from Pollen data with Bclim

Popular man pages

climate_histories: Create Bclim climate_histories
plot.climate_histories: Plots of posterior Bclim climate histories
plot.slice_clouds: Plots of Bclim slice clouds
slice_clouds: Function to approximate pollen slices as climate clouds
summary.climate_histories: Summarises the output created by 'climate_histories'
See all...

All man pages Function index File listing

Man pages

climate_histories: Create Bclim climate_histories
plot.climate_histories: Plots of posterior Bclim climate histories
plot.slice_clouds: Plots of Bclim slice clouds
slice_clouds: Function to approximate pollen slices as climate clouds
summary.climate_histories: Summarises the output created by 'climate_histories'

Functions

climate_histories Man page Source code
plot.climate_histories Man page Source code
plot.slice_clouds Man page Source code
slice_clouds Man page Source code
summary.climate_histories Man page Source code

Files

inst
inst/extdata
inst/extdata/Roya.dat
inst/extdata/Monticchio_pollen.txt
inst/extdata/Roya_pollen_depths.txt
inst/extdata/Roya_pollen.txt
inst/extdata/Monticchio_chron.txt
inst/doc
inst/doc/Bclim.Rmd
inst/doc/Bclim.R
inst/doc/Bclim.html
src
src/use.h
src/PalaeoRecon3D.c
src/use.c
src/BclimMCMC3D.c
NAMESPACE
R
R/slice_clouds.R
R/plot.climate_histories.R
R/summary.climate_histories.R
R/climate_histories.R
R/plot.slice_clouds.R
vignettes
vignettes/Roya.dat
vignettes/Bclim.Rmd
vignettes/Roya_pollen_depths.txt
vignettes/Roya_pollen.txt
MD5
build
build/vignette.rds
DESCRIPTION
man
man/plot.climate_histories.Rd
man/slice_clouds.Rd
man/climate_histories.Rd
man/plot.slice_clouds.Rd
man/summary.climate_histories.Rd
Bclim documentation built on May 19, 2017, 12:54 p.m.

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