BiOFI: Feature Identification Between Metabolome and Microbiome in Disease and Health

A strategy that provides the identification of metabolome and microbiome (Bi-omics) feature. It is able to screen out key/driving features (metabolites, microbes, and pathway functions) by an integrated importance score (IIS),combining sub-scores derived from difference, correlation, abundance, and network analysis. It is able to identify microbe-function-metabolite chains and to rank association pairs within specific functions.

Getting started

Package details

AuthorTianlu Chen [aut, cre]
MaintainerTianlu Chen <chentianlu@sjtu.edu.cn>
LicenseMIT + file LICENSE
Version0.1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("BiOFI")

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BiOFI documentation built on Sept. 22, 2022, 9:07 a.m.