readfiles_BioGeoBEARS_run: Read in the extra input files, if any
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts

Description Usage Arguments Value Note Author(s) References See Also Examples

This function reads input files for stratification, constraints, and detection, i.e., everything except the tree and geography files. E.g., areas_allowed_fn file is just a list of distance matrices, separated by blank lines, from youngest to oldest.

1	readfiles_BioGeoBEARS_run(inputs)

inputs

The inputs list

inputs The modified inputs list

Go BEARS!

Nicholas J. Matzke matzke@berkeley.edu

http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster

Matzke_2012_IBS

define_BioGeoBEARS_run, read_times_fn, read_distances_fn, read_dispersal_multipliers_fn, read_area_of_areas_fn, read_areas_allowed_fn, read_detections, read_controls

test=1

Loading required package: rexpokit
Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: Rcpp
Loading required package: cladoRcpp
Loading required package: ape
Loading required package: phylobase

Attaching package: 'phylobase'

The following object is masked from 'package:ape':

    edges