Stage2_FeartureSelection: Stage 2 Fearture Selection

In BioM2: Biologically Explainable Machine Learning Framework

Stage 2 Fearture Selection

Description

Stage 2 Fearture Selection

Usage

Stage2_FeartureSelection(
  Stage2_FeartureSelection_Method = "RemoveHighcor",
  data = NULL,
  label = NULL,
  cutoff = NULL,
  preMode = NULL,
  classifier = NULL,
  verbose = TRUE,
  cores = 1
)

Arguments

Stage2_FeartureSelection_Method	Feature selection methods. Available options are c(NULL, 'cor', 'wilcox.test','cor_rank','wilcox.test_rank','RemoveHighcor', 'RemoveLinear').
data	The input training dataset. The first column is the label.
label	The label of dataset
cutoff	The cutoff used for feature selection threshold. It can be any value between 0 and 1.
preMode	The prediction mode. "Currently only supports 'probability' for binary classification tasks."
classifier	Learners in mlr3
verbose	Whether to print running process information to the console
cores	The number of cores used for computation.

Value

Column index of feature

Author(s)

Shunjie Zhang

BioM2 documentation built on Aug. 8, 2025, 6:35 p.m.