qc_taxa: Quality Control Check on User Data Against Master Taxa List

In BioMonTools: Biomonitoring and Bioassessment Calculations

Quality Control Check on User Data Against Master Taxa List

Description

This function has been deprecated (March 2026).

Usage

qc_taxa(
  DF_User,
  DF_Official = NULL,
  fun.Community = NULL,
  useOfficialTaxaInfo = "only_Official"
)

Arguments

DF_User	User taxa data.
DF_Official	Official master taxa list. Can be a local file or from a URL. Default is NULL. A NULL value will use the official online files.
fun.Community	Community name for which to compare the master taxa list (bugs or fish).
useOfficialTaxaInfo	Select how to handle new/different taxa. See 'Details' for more information. Valid values are "only_Official", "only_user", "add_new". Default = "only_Official".

Details

The new function is qc_taxa_match_official.

This function exists only as a wrapper to avoid breaking older code.

Value

input data frame with master taxa information added to it.

BioMonTools documentation built on Aug. 5, 2026, 1:08 a.m.