plotSlopes: Plot slopes BioTIME

In BioTIMEr: Tools to Use and Explore the 'BioTIME' Database

Plot slopes BioTIME

Description

Plot slopes BioTIME

Usage

plotSlopes(
  x,
  metric,
  cols,
  taxa = c("Amphibians & reptiles", "Birds", "Chromista", "Fish", "Fungi", "Mammals",
    "Plants"),
  method = c("metric", "taxa", "ind"),
  assemblageID,
  divType = c("alpha", "beta")
)

Arguments

x	A data.frame with columns slopes, metric, taxa, assemblageID
metric	If divtype is alpha, metric must be one of "S", "N", "maxN", "Shannon", "Simpson", "invSimpson", "PIE", "DomMc" or "expShannon". If divtype is beta, metric must be one of "JaccardDiss", "MorisitaHornDiss" or "BrayCurtisDiss".
cols	Name of the column in x from which colouring groups will be based on.
taxa	Necessary if method = "taxa", one of: "Amphibians & reptiles", "Birds", "Chromista", "Fish", "Fungi", "Mammals", "Plants"
method	Character can be one of "metric", "taxa", "ind"
assemblageID	Parameter description
divType	"alpha" or "beta"

Value

A plot

BioTIMEr documentation built on Feb. 10, 2026, 5:08 p.m.