# CARBayes: Spatial Generalised Linear Mixed Models for Areal Unit Data

Implements a class of univariate and multivariate spatial generalised linear mixed models for areal unit data, with inference in a Bayesian setting using Markov chain Monte Carlo (McMC) simulation. The response variable can be binomial, Gaussian or Poisson. Spatial autocorrelation is modelled by a set of random effects, which are assigned a conditional autoregressive (CAR) prior distribution. A number of different CAR priors are available for the random effects, including a multivariate CAR (MCAR) model for multivariate spatial data. Full details are given in the vignette accompanying this package. The initial creation of this package was supported by the Economic and Social Research Council (ESRC) grant RES-000-22-4256, and on-going development was supported by the Engineering and Physical Science Research Council (EPSRC) grant EP/J017442/1.

- Author
- Duncan Lee
- Date of publication
- 2016-06-08 15:40:24
- Maintainer
- Duncan Lee <Duncan.Lee@glasgow.ac.uk>
- License
- GPL (>= 2)
- Version
- 4.6

## Man pages

- CARBayes-package
- Spatial Generalised Linear Mixed Models for Areal Unit Data
- CARBayes-package
- Spatial Generalised Linear Mixed Models for Areal Unit Data
- combine.data.shapefile
- Combines a data frame with a shapefile to create a...
- combine.data.shapefile
- Combines a data frame with a shapefile to create a...
- highlight.borders
- Creates a SpatialPoints object identifying a subset of...
- highlight.borders
- Creates a SpatialPoints object identifying a subset of...
- MVS.CARleroux
- Fit a multivariate spatial generalised linear mixed model to...
- MVS.CARleroux
- Fit a multivariate spatial generalised linear mixed model to...
- print.carbayes
- Print a summary of a fitted carbayes model to the screen.
- print.carbayes
- Print a summary of a fitted carbayes model to the screen.
- S.CARbym
- Fit a spatial generalised linear mixed model to data, where...
- S.CARbym
- Fit a spatial generalised linear mixed model to data, where...
- S.CARdissimilarity
- Fit a spatial generalised linear mixed model to data, where...
- S.CARdissimilarity
- Fit a spatial generalised linear mixed model to data, where...
- S.CARleroux
- Fit a spatial generalised linear mixed model to data, where...
- S.CARleroux
- Fit a spatial generalised linear mixed model to data, where...
- S.CARlocalised
- Fit a spatial generalised linear mixed model to data, where a...
- S.CARlocalised
- Fit a spatial generalised linear mixed model to data, where a...
- summarise.lincomb
- Compute the posterior distribution for a linear combination...
- summarise.lincomb
- Compute the posterior distribution for a linear combination...
- summarise.samples
- Summarise a matrix of Markov chain Monte Carlo samples.
- summarise.samples
- Summarise a matrix of Markov chain Monte Carlo samples.

## Files in this package

CARBayes |

CARBayes/inst |

CARBayes/inst/doc |

CARBayes/inst/doc/CARBayesvignette.R |

CARBayes/inst/doc/CARBayesvignette.pdf |

CARBayes/inst/doc/CARBayesvignette.Rnw |

CARBayes/src |

CARBayes/src/RcppExports.cpp |

CARBayes/src/CARBayes.cpp |

CARBayes/NAMESPACE |

CARBayes/R |

CARBayes/R/poisson.dissimilarityCAR.R |

CARBayes/R/poisson.bymCAR.R |

CARBayes/R/poisson.localisedCAR.R |

CARBayes/R/highlight.borders.R |

CARBayes/R/poisson.MVlerouxCAR.R |

CARBayes/R/combine.data.shapefile.R |

CARBayes/R/S.CARbym.R |

CARBayes/R/binomial.dissimilarityCAR.R |

CARBayes/R/S.CARdissimilarity.R |

CARBayes/R/summarise.samples.R |

CARBayes/R/S.CARleroux.R |

CARBayes/R/binomial.bymCAR.R |

CARBayes/R/binomial.MVlerouxCAR.R |

CARBayes/R/RcppExports.R |

CARBayes/R/gaussian.dissimilarityCAR.R |

CARBayes/R/binomial.lerouxCAR.R |

CARBayes/R/S.CARlocalised.R |

CARBayes/R/binomial.localisedCAR.R |

CARBayes/R/print.carbayes.R |

CARBayes/R/poisson.lerouxCAR.R |

CARBayes/R/MVS.CARleroux.R |

CARBayes/R/summarise.lincomb.R |

CARBayes/R/gaussian.lerouxCAR.R |

CARBayes/vignettes |

CARBayes/vignettes/CARBayesvignette-015.pdf |

CARBayes/vignettes/pricemap.png |

CARBayes/vignettes/crimeplot.png |

CARBayes/vignettes/CARBayesvignette-016.pdf |

CARBayes/vignettes/CARBayesvignette-014.pdf |

CARBayes/vignettes/CARBayesvignette-017.pdf |

CARBayes/vignettes/CARBayesvignette-008.pdf |

CARBayes/vignettes/CARBayesvignette-018.pdf |

CARBayes/vignettes/smrmap.png |

CARBayes/vignettes/CARBayesvignette-006.pdf |

CARBayes/vignettes/CARBayesvignette-019.pdf |

CARBayes/vignettes/boundarymap.png |

CARBayes/vignettes/CARBayesvignette-007.pdf |

CARBayes/vignettes/jss996.bib |

CARBayes/vignettes/CARBayesvignette.Rnw |

CARBayes/MD5 |

CARBayes/build |

CARBayes/build/vignette.rds |

CARBayes/DESCRIPTION |

CARBayes/man |

CARBayes/man/summarise.lincomb.Rd |

CARBayes/man/S.CARleroux.Rd |

CARBayes/man/summarise.samples.Rd |

CARBayes/man/combine.data.shapefile.Rd |

CARBayes/man/S.CARbym.Rd |

CARBayes/man/CARBayes-package.Rd |

CARBayes/man/highlight.borders.Rd |

CARBayes/man/S.CARlocalised.Rd |

CARBayes/man/MVS.CARleroux.Rd |

CARBayes/man/S.CARdissimilarity.Rd |

CARBayes/man/print.carbayes.Rd |