CARBayesST: Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data

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Implements a class of spatio-temporal generalised linear mixed models for areal unit data, with inference in a Bayesian setting using Markov chain Monte Carlo (McMC) simulation. The response variable can be binomial, Gaussian or Poisson. The spatio-temporal autocorrelation is modelled by random effects, which are assigned conditional autoregressive (CAR) style prior distributions. A number of different random effects structures are available, and full details are given in the vignette accompanying this package and the references in the help files. The creation of this package was supported by the Engineering and Physical Sciences Research Council (EPSRC) grant EP/J017442/1 and the Medical Research Council (MRC) grant MR/L022184/1.

Author
Duncan Lee, Alastair Rushworth and Gary Napier
Date of publication
2016-07-28 17:28:23
Maintainer
Duncan Lee <Duncan.Lee@glasgow.ac.uk>
License
GPL (>= 2)
Version
2.4

View on CRAN

Man pages

CARBayesST-package
Spatio-Temporal Generalised Linear Mixed Models For Areal...
coef.CARBayesST
Extract the regression coefficients from a model.
fitted.CARBayesST
Extract the fitted values from a model.
logLik.CARBayesST
Extract the estimated loglikelihood from a fitted model.
model.matrix.CARBayesST
Extract the Model (design) matrix from a model.
print.CARBayesST
Print a summary of the fitted model to the screen.
residuals.CARBayesST
Extract the residuals from a model.
ST.CARadaptive
Fit a spatio-temporal generalised linear mixed model to data...
ST.CARanova
Fit a spatio-temporal generalised linear mixed model to data,...
ST.CARar
Fit a spatio-temporal generalised linear mixed model to data,...
ST.CARlinear
Fit a spatio-temporal generalised linear mixed model to data,...
ST.CARlocalised
Fit a spatio-temporal generalised linear mixed model to data,...
ST.CARsepspatial
Fit a spatio-temporal generalised linear mixed model to data,...

Files in this package

CARBayesST
CARBayesST/inst
CARBayesST/inst/doc
CARBayesST/inst/doc/CARBayesST.Rnw
CARBayesST/inst/doc/CARBayesST.R
CARBayesST/inst/doc/CARBayesST.pdf
CARBayesST/src
CARBayesST/src/RcppExports.cpp
CARBayesST/src/CARBayesST.cpp
CARBayesST/NAMESPACE
CARBayesST/R
CARBayesST/R/ST.CARlocalised.R
CARBayesST/R/binomial.CARanova.R
CARBayesST/R/ST.CARadaptive.R
CARBayesST/R/poisson.CARanova.R
CARBayesST/R/poisson.CARar.R
CARBayesST/R/ST.CARanova.R
CARBayesST/R/logLik.CARBayesST.R
CARBayesST/R/gaussian.CARanova.R
CARBayesST/R/poisson.CARsepspatial.R
CARBayesST/R/fitted.CARBayesST.R
CARBayesST/R/print.CARBayesST.R
CARBayesST/R/gaussian.CARar.R
CARBayesST/R/ST.CARar.R
CARBayesST/R/binomial.CARlinear.R
CARBayesST/R/poisson.CARlocalised.R
CARBayesST/R/RcppExports.R
CARBayesST/R/poisson.CARadaptive.R
CARBayesST/R/residuals.CARBayesST.R
CARBayesST/R/ST.CARlinear.R
CARBayesST/R/gaussian.CARlinear.R
CARBayesST/R/binomial.CARsepspatial.R
CARBayesST/R/coef.CARBayesST.R
CARBayesST/R/binomial.CARar.R
CARBayesST/R/poisson.CARlinear.R
CARBayesST/R/gaussian.CARadaptive.R
CARBayesST/R/ST.CARsepspatial.R
CARBayesST/R/binomial.CARadaptive.R
CARBayesST/R/binomial.CARlocalised.R
CARBayesST/R/model.matrix.CARBayesST.R
CARBayesST/vignettes
CARBayesST/vignettes/salesmap.png
CARBayesST/vignettes/figsim3.png
CARBayesST/vignettes/pollution_mcmc.png
CARBayesST/vignettes/CARBayesST.Rnw
CARBayesST/vignettes/salesboxplot.png
CARBayesST/vignettes/figsim2.png
CARBayesST/vignettes/SMRmap.png
CARBayesST/vignettes/pollution_scatterplot.png
CARBayesST/vignettes/natbib.sty
CARBayesST/vignettes/salesmapest.png
CARBayesST/vignettes/salestrend.png
CARBayesST/vignettes/CARBayesST.bib
CARBayesST/vignettes/figsim.png
CARBayesST/MD5
CARBayesST/build
CARBayesST/build/vignette.rds
CARBayesST/DESCRIPTION
CARBayesST/man
CARBayesST/man/ST.CARsepspatial.Rd
CARBayesST/man/print.CARBayesST.Rd
CARBayesST/man/logLik.CARBayesST.Rd
CARBayesST/man/ST.CARlocalised.Rd
CARBayesST/man/ST.CARadaptive.Rd
CARBayesST/man/fitted.CARBayesST.Rd
CARBayesST/man/ST.CARanova.Rd
CARBayesST/man/model.matrix.CARBayesST.Rd
CARBayesST/man/ST.CARlinear.Rd
CARBayesST/man/coef.CARBayesST.Rd
CARBayesST/man/ST.CARar.Rd
CARBayesST/man/CARBayesST-package.Rd
CARBayesST/man/residuals.CARBayesST.Rd