CARBayesST: Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data

Implements a class of spatio-temporal generalised linear mixed models for areal unit data, with inference in a Bayesian setting using Markov chain Monte Carlo (MCMC) simulation. The response variable can be binomial, Gaussian or Poisson, but for some models only the binomial and Poisson data likelihoods are available. The spatio-temporal autocorrelation is modelled by random effects, which are assigned conditional autoregressive (CAR) style prior distributions. A number of different random effects structures are available, and full details are given in the vignette accompanying this package and the references in the help files. The creation of this package was supported by the Engineering and Physical Sciences Research Council (EPSRC) grant EP/J017442/1 and the Medical Research Council (MRC) grant MR/L022184/1.

Install the latest version of this package by entering the following in R:
install.packages("CARBayesST")
AuthorDuncan Lee, Alastair Rushworth and Gary Napier
Date of publication2017-03-16 12:26:02
MaintainerDuncan Lee <Duncan.Lee@glasgow.ac.uk>
LicenseGPL (>= 2)
Version2.5
http://github.com/duncanplee/CARBayesST

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Files

inst
inst/doc
inst/doc/CARBayesST.Rnw
inst/doc/CARBayesST.R
inst/doc/CARBayesST.pdf
tests
tests/testthat.R
tests/testthat
tests/testthat/test-binomial.R tests/testthat/test-gaussian.R tests/testthat/test-poisson.R
src
src/registerDynamicSymbol.c
src/RcppExports.cpp
src/CARBayesST.cpp
NAMESPACE
R
R/ST.CARlocalised.R R/binomial.CARanova.R R/ST.CARadaptive.R R/poisson.CARanova.R R/poisson.CARar.R R/ST.CARanova.R R/logLik.CARBayesST.R R/gaussian.CARanova.R R/poisson.CARsepspatial.R R/fitted.CARBayesST.R R/print.CARBayesST.R R/gaussian.CARar.R R/ST.CARar.R R/binomial.CARlinear.R R/poisson.CARlocalised.R R/RcppExports.R R/poisson.CARadaptive.R R/residuals.CARBayesST.R R/ST.CARlinear.R R/gaussian.CARlinear.R R/binomial.CARsepspatial.R R/coef.CARBayesST.R R/common.functions.R R/binomial.CARar.R R/poisson.CARlinear.R R/gaussian.CARadaptive.R R/ST.CARsepspatial.R R/binomial.CARadaptive.R R/binomial.CARlocalised.R R/model.matrix.CARBayesST.R
vignettes
vignettes/salesmap.png
vignettes/pollution_mcmc.png
vignettes/Chicago.bst
vignettes/CARBayesST.Rnw
vignettes/figsim1.png
vignettes/salesboxplot.png
vignettes/SMRmap.png
vignettes/jss.dtx
vignettes/natbib.sty
vignettes/jsslogo.jpg
vignettes/salesmapest.png
vignettes/salestrend.png
vignettes/pollutionscatterplot.png
vignettes/CARBayesST.bib
MD5
build
build/vignette.rds
DESCRIPTION
man
man/ST.CARsepspatial.Rd man/print.CARBayesST.Rd man/logLik.CARBayesST.Rd man/ST.CARlocalised.Rd man/ST.CARadaptive.Rd man/fitted.CARBayesST.Rd man/ST.CARanova.Rd man/model.matrix.CARBayesST.Rd man/ST.CARlinear.Rd man/coef.CARBayesST.Rd man/ST.CARar.Rd man/CARBayesST-package.Rd man/residuals.CARBayesST.Rd

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