CCpop: One and two locus GWAS of binary phenotype with case-control-population design
Version 1.0

Tests of association between SNPs or pairs of SNPs and binary phenotypes, in case-control / case-population / case-control-population studies.

AuthorShachar Kaufman
Date of publication2014-03-24 12:03:06
MaintainerShachar Kaufman <shachark@post.tau.ac.il>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("CCpop")

Getting started

Package overview

Popular man pages

CCpop-package: One and two locus GWAS of binary phenotype with...
marginal.assoc.tests: Marginal association tests
pairwise.assoc.tests: Pairwise association tests
See all...

All man pages Function index File listing

Man pages

CCpop-package: One and two locus GWAS of binary phenotype with...
marginal.assoc.tests: Marginal association tests
pairwise.assoc.tests: Pairwise association tests

Functions

CCpop Man page
CCpop-package Man page
conditional.assoc.test.pure.pop.hwe.le.kpy Man page Source code
logistic Source code
logit Source code
marginal.assoc.test.hwe.in.controls Man page Source code
marginal.assoc.test.kpx.kpy Man page Source code
marginal.assoc.test.pop.hwe.kpy Man page Source code
marginal.assoc.test.unconstrained.chisq Man page Source code
marginal.assoc.test.unconstrained.gsq Man page Source code
marginal.assoc.tests Man page
my.chisq.test.2d Source code
my.chisq.test.3d Source code
my.g.test.2d Source code
my.g.test.3d Source code
pairwise.assoc.test.case.only Man page Source code
pairwise.assoc.test.hwe.le.kpy Man page Source code
pairwise.assoc.test.ind.3d Man page Source code
pairwise.assoc.test.kpx.kpy Man page Source code
pairwise.assoc.test.kpy Man page Source code
pairwise.assoc.test.pop.hwe.le.kpy Man page Source code
pairwise.assoc.test.pop.kpy Man page Source code
pairwise.assoc.test.pure.pop.hwe.le.kpy Man page Source code
pairwise.assoc.test.pure.pop.kpy Man page Source code
pairwise.assoc.test.pure.unconstrained Man page Source code
pairwise.assoc.test.unconstrained.chisq Man page Source code
pairwise.assoc.test.unconstrained.gsq Man page Source code
pairwise.assoc.tests Man page

Files

NAMESPACE
R
R/pairwise_assoc_tests.r
R/marginal_assoc_tests.r
MD5
DESCRIPTION
man
man/CCpop-package.Rd
man/marginal.assoc.tests.Rd
man/pairwise.assoc.tests.Rd
CCpop documentation built on May 19, 2017, 2:15 p.m.

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