CCpop: One and two locus GWAS of binary phenotype with case-control-population design

Tests of association between SNPs or pairs of SNPs and binary phenotypes, in case-control / case-population / case-control-population studies.

AuthorShachar Kaufman
Date of publication2014-03-24 12:03:06
MaintainerShachar Kaufman <shachark@post.tau.ac.il>
LicenseGPL-2
Version1.0

View on CRAN

Functions

CCpop Man page
CCpop-package Man page
conditional.assoc.test.pure.pop.hwe.le.kpy Man page
marginal.assoc.test.hwe.in.controls Man page
marginal.assoc.test.kpx.kpy Man page
marginal.assoc.test.pop.hwe.kpy Man page
marginal.assoc.tests Man page
marginal.assoc.test.unconstrained.chisq Man page
marginal.assoc.test.unconstrained.gsq Man page
pairwise.assoc.test.case.only Man page
pairwise.assoc.test.hwe.le.kpy Man page
pairwise.assoc.test.ind.3d Man page
pairwise.assoc.test.kpx.kpy Man page
pairwise.assoc.test.kpy Man page
pairwise.assoc.test.pop.hwe.le.kpy Man page
pairwise.assoc.test.pop.kpy Man page
pairwise.assoc.test.pure.pop.hwe.le.kpy Man page
pairwise.assoc.test.pure.pop.kpy Man page
pairwise.assoc.test.pure.unconstrained Man page
pairwise.assoc.tests Man page
pairwise.assoc.test.unconstrained.chisq Man page
pairwise.assoc.test.unconstrained.gsq Man page

Files

CCpop
CCpop/NAMESPACE
CCpop/R
CCpop/R/pairwise_assoc_tests.r
CCpop/R/marginal_assoc_tests.r
CCpop/MD5
CCpop/DESCRIPTION
CCpop/man
CCpop/man/CCpop-package.Rd CCpop/man/marginal.assoc.tests.Rd CCpop/man/pairwise.assoc.tests.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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