compute_MAF: Compute minor allele frequency of genetic variants.
In CJAMP: Copula-Based Joint Analysis of Multiple Phenotypes
Description
Usage
Arguments
Value
Examples
Description
Function to compute the minor allele frequency (MAF) of
one or more genetic variants.
Usage
1
compute_MAF(genodata)
Arguments
genodata
Numeric vector or dataframe containing the genetic variants
in columns. Must be in allelic coding 0, 1, 2.
Value
A vector containing the minor allele frequencies of the variants.
Examples
1
2
3
4
5
6
7
8
# Example of a single variant
set.seed(10)
genodata <- stats::rbinom(2000, 2, 0.3)
compute_MAF(genodata)
# Example of a set of variants
genodata <- generate_genodata()
compute_MAF(genodata)
CJAMP documentation built on May 1, 2019, 9:15 p.m.
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Description Usage Arguments Value Examples
Description
Function to compute the minor allele frequency (MAF) of one or more genetic variants.
Usage
1 | compute_MAF(genodata)
|
Arguments
genodata |
Numeric vector or dataframe containing the genetic variants in columns. Must be in allelic coding 0, 1, 2. |
Value
A vector containing the minor allele frequencies of the variants.
Examples
1 2 3 4 5 6 7 8 | # Example of a single variant
set.seed(10)
genodata <- stats::rbinom(2000, 2, 0.3)
compute_MAF(genodata)
# Example of a set of variants
genodata <- generate_genodata()
compute_MAF(genodata)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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