CMplot: Circle Manhattan Plot

Manhattan plot, a type of scatter plot, was widely used to display the association results. However, it is usually time-consuming and laborious for a non-specialist user to write scripts and adjust parameters of an elaborate plot. Moreover, the ever-growing traits measured have necessitated the integration of results from different Genome-wide association study researches. Circle Manhattan Plot is the first open R package that can lay out Genome-wide association study P-value results in both traditional rectangular patterns, QQ-plot and novel circular ones. United in only one bull's eye style plot, association results from multiple traits can be compared interactively, thereby to reveal both similarities and differences between signals.

Author
LiLin-Yin
Date of publication
2016-07-13 10:48:00
Maintainer
LiLin-Yin <ylilin@163.com>
License
GPL (>= 2)
Version
3.1.4
URLs

View on CRAN

Man pages

cattle50K
Genotyped by Bovine50K chip
CMplot-package
Circle Manhattan Plot
pig60K
Genotyped by pig 60k chip

Files in this package

CMplot
CMplot/NAMESPACE
CMplot/data
CMplot/data/pig60K.rda
CMplot/data/datalist
CMplot/data/cattle50K.rda
CMplot/R
CMplot/R/CMplot.r
CMplot/MD5
CMplot/DESCRIPTION
CMplot/man
CMplot/man/CMplot-package.Rd
CMplot/man/pig60K.Rd
CMplot/man/cattle50K.Rd