CRABS: Congruent Rate Analyses in Birth-Death Scenarios

Features tools for exploring congruent phylogenetic birth-death models. It can construct the pulled speciation- and net-diversification rates from a reference model. Given alternative speciation- or extinction rates, it can construct new models that are congruent with the reference model. Functionality is included to sample new rate functions, and to visualize the distribution of one congruence class. See also Louca & Pennell (2020) <doi:10.1038/s41586-020-2176-1>.

Package details

AuthorBjørn Tore Kopperud [aut, cre], Sebastian Höhna [aut], Andrew F. Magee [aut], Jérémy Andréoletti [aut]
MaintainerBjørn Tore Kopperud <kopperud@protonmail.com>
LicenseGPL-3
Version1.2.0
URL https://github.com/afmagee/CRABS
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CRABS")

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CRABS documentation built on Oct. 24, 2023, 5:06 p.m.