Files in Certara.Xpose.NLME
Enhances 'xpose' Diagnostics for Pharmacometric Models from 'Certara.RsNLME' and Phoenix NLME

MD5
README.md
NAMESPACE
DESCRIPTION
R/prepare_inputStparmResid.R R/load_convergenceData.R R/create_prmDF.R R/add_whichReset.R R/covariate_plots.R R/get_mappedCovariates.R R/xposeNlmeUtils.r R/create_xposeNlme.R R/join_d1Etas.R R/get_shrinkages.R R/create_overallDF.R R/xposeNlmeModel.R R/get_term.R R/xposeNlme.R R/ggNlme.R R/create_input.R R/create_data_ind.R R/add_descrXpose.R R/get_runtime.R R/get_overallNlme.R R/add_unitsdata_ind.R R/get_prmNlme.R R/get_covColNames.R R/get_covtime.R R/sort_dataID.R R/xplot_box.R R/prepare_inputStparm.R R/read_progressFile.R R/add_EVID.R R/globals.R R/examples.R R/get_method.R R/read_dataFile.R
inst/extdata/multIDs_xposeNlmeModel/multIDs_xposeNlmeModel_result.RData
inst/extdata/multIDs_xposeNlmeModel/multIDs_xposeNlmeModel_model.RData
inst/extdata/eta_distrib/OneCpt1stOrderAbsorp_CountHazardImax.csv
inst/extdata/eta_distrib/OneCpt1stOrderAbsorp_CountHazardImax_dmp.json
inst/extdata/eta_distrib/OneCpt1stOrderAbsorp_CountHazardImax_residuals.csv
inst/extdata/eta_distrib/OneCpt1stOrderAbsorp_CountHazardImax_nlme7engine.log
inst/extdata/TwCpt_IVBolus_FOCE_ELS/TwCpt_IVBolus_model.RData
inst/extdata/TwCpt_IVBolus_FOCE_ELS/TwCpt_IVBolus_result.RData
inst/extdata/SpecialCovNameSaveAsInputData/nlme7engine.log
inst/extdata/SpecialCovNameSaveAsInputData/dmp.txt
inst/extdata/SpecialCovNameSaveAsInputData/data1.txt
inst/extdata/SpecialCovNameSaveAsInputData/ConvergenceData.csv
inst/extdata/prm_iteration/OneCpt_Parallel1stOrderAbsorp_dmp.json
inst/extdata/prm_iteration/OneCpt_Parallel1stOrderAbsorp_ConvergenceData.csv
inst/extdata/prm_iteration/OneCpt_Parallel1stOrderAbsorp_residuals.csv
inst/extdata/prm_iteration/OneCpt_Parallel1stOrderAbsorp.csv
inst/extdata/prm_iteration/OneCpt_Parallel1stOrderAbsorp_nlme7engine.log
inst/extdata/emax_xposeNlmeModel/emax_xposeNlmeModel_result.RData
inst/extdata/emax_xposeNlmeModel/emax_xposeNlmeModel_model.RData
inst/extdata/ThreeCpt_IVIM_Naive/ThreeCpt_IVIM_Naive_Model.RData
inst/extdata/ThreeCpt_IVIM_Naive/ThreeCpt_IVIM_Naive_Results.RData
inst/extdata/time_model/nlme7engine.log
inst/extdata/time_model/dmp.txt
inst/extdata/time_model/data1.txt
inst/extdata/time_model/progress.txt
inst/extdata/combined_gof/pkData.csv
inst/extdata/combined_gof/test1_dmp.json
inst/extdata/combined_gof/test1_ConvergenceData.csv
inst/extdata/combined_gof/test1_residuals.csv
inst/extdata/combined_gof/test1_nlme7engine.log
inst/extdata/notime_model/nlme7engine.log
inst/extdata/notime_model/dmp.txt
inst/extdata/notime_model/data1.txt
inst/extdata/notime_model/progress.txt
inst/extdata/cov_distrib/data1.csv
inst/extdata/cov_distrib/covmodel_dmp.json
inst/extdata/cov_distrib/covmodel_nlme7engine.log
inst/extdata/cov_distrib/covmodel_residuals.csv
inst/extdata/Emax_Baseline_2Cat1ContCovariates/nlme7engine.log
inst/extdata/Emax_Baseline_2Cat1ContCovariates/dmp.txt
inst/extdata/Emax_Baseline_2Cat1ContCovariates/data1.txt
inst/extdata/Emax_Baseline_2Cat1ContCovariates/ConvergenceData.csv
tests/testthat.R tests/testthat/test_time_xposeNlmeModel.R tests/testthat/test_get_prmNlme.R tests/testthat/test_prm_iteration.R tests/testthat/test_Emax_Baseline_T_SpecialCovNameSaveAsInputData.R tests/testthat/test_notime_model.R tests/testthat/test_time_model.R tests/testthat/test_multIDs_xposeNlmeModel.R tests/testthat/test_cov_distrib.R tests/testthat/test_eta_distrib.R tests/testthat/test_combined_gof.R tests/testthat/test_Emax_Baseline_2Cat1ContCovariates.R tests/testthat/test_emax_xposeNlmeModel.R tests/testthat/_snaps/Emax_Baseline_2Cat1ContCovariates.md tests/testthat/_snaps/notime_model.md tests/testthat/_snaps/emax_xposeNlmeModel.md tests/testthat/_snaps/time_model.md tests/testthat/_snaps/multIDs_xposeNlmeModel.md tests/testthat/_snaps/cov_distrib.md tests/testthat/_snaps/get_prmNlme.md tests/testthat/_snaps/eta_distrib.md tests/testthat/_snaps/combined_gof.md tests/testthat/_snaps/Emax_Baseline_T_SpecialCovNameSaveAsInputData.md tests/testthat/_snaps/time_xposeNlmeModel.md tests/testthat/_snaps/prm_iteration.md
tests/testthat/_snaps/cov_distrib/windows_eta_vs_cov_wt.png
tests/testthat/_snaps/cov_distrib/windows_eta_vs_cov_sex.png
tests/testthat/_snaps/cov_distrib/windows.nlme.ranpar.vs.cov.png
tests/testthat/_snaps/cov_distrib/windows_res_vs_cov_sex.png
tests/testthat/_snaps/cov_distrib/windows_prm_vs_cov_wt.png
tests/testthat/_snaps/cov_distrib/windows.nlme.var.vs.cov.png
tests/testthat/_snaps/cov_distrib/windows_res_vs_cov_wt.png
tests/testthat/_snaps/cov_distrib/windows.nlme.par.vs.cov.png
tests/testthat/_snaps/cov_distrib/windows.nlme.cov.splom.png
tests/testthat/_snaps/cov_distrib/windows_prm_vs_cov_sex.png
data/xpdb_ex_Nlme.rda
man/res_vs_cov.Rd man/nlme.cov.splom.Rd man/nlme.var.vs.cov.Rd man/xposeNlme.Rd man/nlme.ranpar.vs.cov.Rd man/get_overallNlme.Rd man/eta_vs_cov.Rd man/prm_vs_cov.Rd man/xplot_box.Rd man/nlme.par.vs.cov.Rd man/xposeNlmeModel.Rd man/get_prmNlme.Rd man/xpdb_ex_Nlme.Rd
Certara.Xpose.NLME documentation built on April 3, 2025, 7:45 p.m.