tests/testthat/_snaps/combined_gof.md

In Certara.Xpose.NLME: Enhances 'xpose' Diagnostics for Pharmacometric Models from 'Certara.RsNLME' and Phoenix NLME

xposeNlme works with ConvergenceData

Code
  tail(as.data.frame(xpdb$files$data[[1]]))
Output
      ITERATION     -2LL     tvV    tvCl    tvV2   tvCl2
  102       102 1265.666 15.3337 6.51169 41.2855 13.9113
  103       103 1265.615 15.3658 6.55316 41.2367 13.9507
  104       104 1265.591 15.4144 6.59599 41.1878 14.0387
  105       105 1265.591 15.4145 6.59571 41.1885 14.0388
  106       106 1265.591 15.4057 6.59722 41.1980 14.0361
  107       107 1265.591 15.4073 6.60153 41.1965 14.0376

Code
  tail(as.data.frame(xpdb$data$data[[1]]))
Output
      Subject Nom_Time Act_Time Amount Conc Age BodyWeight Gender ID WhichReset
  107      16        1     0.47     NA 1190  44         44   male 16          0
  108      16        1     0.85     NA  535  44         44   male 16          0
  109      16        2     1.95     NA  333  44         44   male 16          0
  110      16        4     3.91     NA  341  44         44   male 16          0
  111      16        8     7.98     NA  273  44         44   male 16          0
  112      16       24    24.19     NA  101  44         44   male 16          0
       TIME        V       Cl       V2     Cl2 Scenario  IVAR   TAD     PRED
  107  0.47 11.52332 3.299965 41.19646 16.6426 WorkFlow  0.47  0.47 899.6240
  108  0.85 11.52332 3.299965 41.19646 16.6426 WorkFlow  0.85  0.85 600.1780
  109  1.95 11.52332 3.299965 41.19646 16.6426 WorkFlow  1.95  1.95 286.6330
  110  3.91 11.52332 3.299965 41.19646 16.6426 WorkFlow  3.91  3.91 191.0660
  111  7.98 11.52332 3.299965 41.19646 16.6426 WorkFlow  7.98  7.98 129.5720
  112 24.19 11.52332 3.299965 41.19646 16.6426 WorkFlow 24.19 24.19  29.2022
          IPRED   DV       IRES PREDSE      Weight     IWRES      WRES     CWRES
  107 1039.8700 1190  150.12600      0 9.24780e-07  0.896131  0.969771  0.776129
  108  663.0510  535 -128.05100      0 2.27461e-06 -1.198760 -1.008010 -1.059890
  109  366.2620  333  -33.26190      0 7.45447e-06 -0.563705  1.095150  0.713126
  110  300.9990  341   40.00100      0 1.10375e-05  0.824902  2.421830  1.901550
  111  239.5730  273   33.42660      0 1.74230e-05  0.866062  1.735700  1.237510
  112   97.2039  101    3.79608      0 1.05836e-04  0.242408  2.906300  0.193101
      CdfDV ObsName WhichDose         nV      nCl         nV2      nCl2 EVID
  107     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0
  108     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0
  109     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0
  110     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0
  111     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0
  112     0    CObs         1 -0.2904696 -0.69339 2.82963e-08 0.1702261    0

Certara.Xpose.NLME documentation built on April 3, 2025, 7:45 p.m.