ChIPtest: Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data

Nonparametric Tests to identify the differential enrichment region for two conditions or time-course ChIP-seq data. It includes: data preprocessing function, estimation of a small constant used in hypothesis testing, a kernel-based two sample nonparametric test, two assumption-free two sample nonparametric test.

Package details

AuthorVicky Qian Wu ; Kyoung-Jae Won ; Hongzhe Li <[email protected]>
MaintainerVicky Qian Wu <[email protected]>
LicenseGPL (>= 2.15.1)
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("ChIPtest")

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ChIPtest documentation built on May 2, 2019, 3:37 p.m.