ClusteredMutations: Location and Visualization of Clustered Somatic Mutations

Identification and visualization of groups of closely spaced mutations in the DNA sequence of cancer genome. The extremely mutated zones are searched in the symmetric dissimilarity matrix using the anti-Robinson matrix properties. Different data sets are obtained to describe and plot the clustered mutations information.

Install the latest version of this package by entering the following in R:
install.packages("ClusteredMutations")
AuthorDavid Lora [aut, cre]
Date of publication2016-04-29 07:44:36
MaintainerDavid Lora <david@h12o.es>
LicenseGPL-3
Version1.0.1

View on CRAN

Files

inst
inst/doc
inst/doc/vignetteClustered.R
inst/doc/vignetteClustered.Rnw
inst/doc/vignetteClustered.pdf
NAMESPACE
data
data/PD4107a.rda
R
R/showers.R R/dissmutmatrix.R R/imd.R R/features.R
vignettes
vignettes/ClusteredMutationsVignettes.bib
vignettes/figura1.pdf
vignettes/vignetteClustered.Rnw
vignettes/figura3.pdf
MD5
build
build/vignette.rds
DESCRIPTION
man
man/imd.Rd man/features.Rd man/showers.Rd man/PD4107a.Rd man/dissmutmatrix.Rd

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