ClusteredMutations: Location and Visualization of Clustered Somatic Mutations

Identification and visualization of groups of closely spaced mutations in the DNA sequence of cancer genome. The extremely mutated zones are searched in the symmetric dissimilarity matrix using the anti-Robinson matrix properties. Different data sets are obtained to describe and plot the clustered mutations information.

AuthorDavid Lora [aut, cre]
Date of publication2016-04-29 07:44:36
MaintainerDavid Lora <david@h12o.es>
LicenseGPL-3
Version1.0.1

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ClusteredMutations
ClusteredMutations/inst
ClusteredMutations/inst/doc
ClusteredMutations/inst/doc/vignetteClustered.R
ClusteredMutations/inst/doc/vignetteClustered.Rnw
ClusteredMutations/inst/doc/vignetteClustered.pdf
ClusteredMutations/NAMESPACE
ClusteredMutations/data
ClusteredMutations/data/PD4107a.rda
ClusteredMutations/R
ClusteredMutations/R/showers.R ClusteredMutations/R/dissmutmatrix.R ClusteredMutations/R/imd.R ClusteredMutations/R/features.R
ClusteredMutations/vignettes
ClusteredMutations/vignettes/ClusteredMutationsVignettes.bib
ClusteredMutations/vignettes/figura1.pdf
ClusteredMutations/vignettes/vignetteClustered.Rnw
ClusteredMutations/vignettes/figura3.pdf
ClusteredMutations/MD5
ClusteredMutations/build
ClusteredMutations/build/vignette.rds
ClusteredMutations/DESCRIPTION
ClusteredMutations/man
ClusteredMutations/man/imd.Rd ClusteredMutations/man/features.Rd ClusteredMutations/man/showers.Rd ClusteredMutations/man/PD4107a.Rd ClusteredMutations/man/dissmutmatrix.Rd

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