summariseSequenceRatios: Sequence ratio calculations

In CohortSymmetry: Sequence Symmetry Analysis Using the Observational Medical Outcomes Partnership Common Data Model

Sequence ratio calculations

Description

Using generateSequenceCohortSet to obtain sequence ratios for the desired outcomes.

Usage

summariseSequenceRatios(cohort, cohortId = NULL, confidenceInterval = 95)

Arguments

cohort	A cohort table in the cdm.
cohortId	The Ids in the cohort that are to be included in the analyses.
confidenceInterval	Default is 95, indicating the central 95% confidence interval.

Value

A local table with all the analyses.

Examples

library(CohortSymmetry)
cdm <- mockCohortSymmetry()
cdm <- generateSequenceCohortSet(cdm = cdm,
                                 name = "joined_cohorts",
                                 indexTable = "cohort_1",
                                 markerTable = "cohort_2")
pssa_result <- summariseSequenceRatios(cohort = cdm$joined_cohorts)
pssa_result
CDMConnector::cdmDisconnect(cdm)

CohortSymmetry documentation built on April 3, 2025, 5:26 p.m.