ComICS: Computational Methods for Immune Cell-Type Subsets

Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.

Install the latest version of this package by entering the following in R:
install.packages("ComICS")
AuthorYael Steuerman [aut, cre], Irit Gat-Viks [aut]
Date of publication2016-03-07 22:38:53
MaintainerYael Steuerman <yaelsteu@mail.tau.ac.il>
LicenseGPL-2
Version1.0.3
http://dcq.tau.ac.il/
http://csgi.tau.ac.il/VoCAL/

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