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Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.
Package details |
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Author | Yael Steuerman [aut, cre], Irit Gat-Viks [aut] |
Maintainer | Yael Steuerman <yaelsteu@mail.tau.ac.il> |
License | GPL-2 |
Version | 1.0.4 |
URL | http://dcq.tau.ac.il/ http://csgi.tau.ac.il/VoCAL/ |
Package repository | View on CRAN |
Installation |
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