tree6: Example of phylogenetic tree containing 6 species.

In CommEcol: Community Ecology Analyses

Description

Example of phylogenetic tree containing 6 species

Usage

data(tree6)

Format

The format is: List of 4 $ edge : int [1:10, 1:2] 7 8 9 9 8 10 10 7 11 11 ... $ Nnode : int 5 $ tip.label : chr [1:6] "taxon_1" "taxon_2" "taxon_4" "taxon_3" ... $ edge.length: num [1:10] 1 1 1 1 1 1 1 1 2 2 - attr(*, "class")= chr "phylo"

Examples

data(tree6)
plot(tree6)

Example output

Loading required package: vegan
Loading required package: permute
Loading required package: lattice
This is vegan 2.5-7
Loading required package: ape
Loading required package: picante
Loading required package: nlme
Loading required package: adespatial
Registered S3 methods overwritten by 'adegraphics':
  method         from
  biplot.dudi    ade4
  kplot.foucart  ade4
  kplot.mcoa     ade4
  kplot.mfa      ade4
  kplot.pta      ade4
  kplot.sepan    ade4
  kplot.statis   ade4
  scatter.coa    ade4
  scatter.dudi   ade4
  scatter.nipals ade4
  scatter.pco    ade4
  score.acm      ade4
  score.mix      ade4
  score.pca      ade4
  screeplot.dudi ade4
Registered S3 method overwritten by 'spdep':
  method   from
  plot.mst ape 
Registered S3 methods overwritten by 'adespatial':
  method             from       
  plot.multispati    adegraphics
  print.multispati   ade4       
  summary.multispati ade4       
Loading required package: betapart

CommEcol documentation built on March 16, 2021, 9:07 a.m.