CpGFilter: CpG Filtering Method Based on Intra-Class Correlation Coefficients
Version 1.1

Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.

Getting started

Package details

AuthorJun Chen <[email protected]>
Date of publication2017-08-23 22:09:07 UTC
MaintainerJun Chen <[email protected]>
LicenseGPL-3
Version1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CpGFilter")

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CpGFilter documentation built on Aug. 24, 2017, 1:06 a.m.