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CpGFilter: CpG Filtering Method Based on Intra-Class Correlation Coefficients
Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.
Getting started
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Package details |
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| Author | Jun Chen <Chen.Jun2@mayo.edu> |
| Maintainer | Jun Chen <chen.jun2@mayo.edu> |
| License | GPL-3 |
| Version | 1.1 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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