CpGFilter: CpG Filtering Method Based on Intra-class Correlation Coefficients
Version 1.0

Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.

Package details

AuthorJun Chen
Date of publication2014-11-06 01:21:42
MaintainerJun Chen <chen.jun2@mayo.edu>
LicenseGPL-2
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CpGFilter")

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CpGFilter documentation built on May 29, 2017, 9:46 a.m.