odk2openVA_v151: Map VA records (version 1.5.1) to InterVA5 & InSilico (with...

In CrossVA: Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms

Description

odk2openVA_v151 transforms data collected with the 2016 WHO VA instrument (version 1.5.1) to serve as the input for the InterVA5 and InSilicoVA alogrithms for coding cause of death. Note: versions 1.5.2 and 1.5.2 do not include changes that require modification for the data preparation, so the code for version 1.5.1 should also work for these later two versions.

Usage

odk2openVA_v151(odk, id_col = "meta.instanceID")

Arguments

odk	A dataframe, obtained from reading an ODK Briefcase export of records collected with the WHO questionnaire.
id_col	A character string of the column name (in odk) with the unique ID for each death.

Examples

## Not run: 
record_f_name <- system.file("sample", "who151_odk_export.csv", package = "CrossVA")
records <- read.csv(record_f_name, stringsAsFactors = FALSE)
output <- odk2openVA_v151(records)

## End(Not run)

CrossVA documentation built on Aug. 11, 2021, 1:06 a.m.