DBGSA: methods of distance-based gene set functional enrichment analysis.

This package provides methods and examples to support a method of Gene Set Analysis (GSA). DBGSA is a novel distance-based gene set enrichment analysis method. We consider that, the distance between 2 groups with different phenotype by focusing on the gene expression should be larger, if a certain gene functional set was significantly associated with a particular phenotype.

AuthorLi Jin, Huang Meilin
Date of publication2012-01-16 07:32:40
MaintainerLi Jin <lijin@hrbmu.edu.cn>
LicenseGPL-3
Version1.2

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Files in this package

DBGSA
DBGSA/MD5
DBGSA/R
DBGSA/R/valuep.R
DBGSA/R/randdis.R
DBGSA/R/functionall.R DBGSA/R/distable.R
DBGSA/R/centdis.R
DBGSA/R/avelinkdis.R
DBGSA/NAMESPACE
DBGSA/man
DBGSA/man/valuep.Rd DBGSA/man/randdis.Rd DBGSA/man/rand.Rd DBGSA/man/functionall.Rd DBGSA/man/distance.Rd DBGSA/man/distable.Rd DBGSA/man/DBGSA-package.Rd DBGSA/man/centdis.Rd DBGSA/man/b1.Rd DBGSA/man/avelinkdis.Rd DBGSA/man/afExp.Rd
DBGSA/DESCRIPTION
DBGSA/data
DBGSA/data/rand.rda
DBGSA/data/distance.rda
DBGSA/data/datalist
DBGSA/data/b1.txt.gz
DBGSA/data/afExp.rda

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