DCODE: List Linear n-Peptide Constraints for Overlapping Protein Regions
Version 1.0

Traversal graph algorithm for listing linear n-peptide constraints for overlapping protein regions. (Lebre and Gascuel, The combinatorics of overlapping genes, freely available from arXiv at : http://arxiv.org/abs/1602.04971).

AuthorSophie Lebre
Date of publication2016-03-10 17:55:18
MaintainerSophie Lebre <sophie.lebre@umontpellier.fr>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("DCODE")

Getting started

Package overview

Popular man pages

build_data: Function to build the elements 'aaList', 'geneticCode',...
DCODE-internal: Internal DCODE Functions
DCODE-package: List Linear n-Peptide Constraints for Overlapping Protein...
getConstraint: Function giving the linear constraint associated with the...
See all...

All man pages Function index File listing

Man pages

build_data: Function to build the elements 'aaList', 'geneticCode',...
DCODE-internal: Internal DCODE Functions
DCODE-package: List Linear n-Peptide Constraints for Overlapping Protein...
getConstraint: Function giving the linear constraint associated with the...

Functions

DCODE Man page
DCODE-package Man page
build_data Man page Source code
compRev Man page Source code
deleteStops Man page Source code
getAllSeqs Man page Source code
getConstraint Man page Source code
getConstraint_rec1 Man page Source code
getConstraint_rec2 Man page Source code
pepList Man page
posLecturef1 Man page Source code
posLecturef2 Man page Source code
printConstraint Man page Source code
stopCodons Man page
toPep Man page Source code

Files

NAMESPACE
R
R/build_data.R
R/DCODE-internal.R
R/getConstraint_rec2.R
R/printConstraint.R
R/toPep.R
R/getConstraint.R
R/getAllSeqs.R
R/getConstraint_rec1.R
R/deleteStops.R
R/posLecturef2.R
R/compRev.R
R/posLecturef1.R
MD5
DESCRIPTION
man
man/getConstraint.Rd
man/build_data.Rd
man/DCODE-package.Rd
man/DCODE-internal.Rd
DCODE documentation built on May 19, 2017, 7:08 a.m.

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