DEET_feature_extract_example_matrix: DEET_feature_extract_example_matrix

In DEET: Differential Expression Enrichment Tool

DEET_feature_extract_example_matrix

Description

An object of class data.frame where rows are genes and columns are comparisons. The matrix is populated by the log2Fold-change of each gene within each study. If the gene is not detected within that study, it is populated with 0 instead of the log2Fold-change. This object is inputted into the 'mat' input variable for the 'DEET_feature_extract' function. This example takes 1000 random genes and 200 random studies (seed = 1234s).

Usage

data(DEET_feature_extract_example_matrix)

Format

An object of class data.frame where rows are genes and columns are comparisons (1000 randomly selected genes and 200 randomly selected studies).

Examples

data(DEET_feature_extract_example_matrix)

DEET documentation built on June 26, 2024, 5:08 p.m.