Files in DEploid.utils
'DEploid' Data Analysis and Results Interpretation

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R R/plotting.R R/errorAnalysis.r R/deploid_utils.R R/all_tools.R R/interface.R
src/Makevars.win
src/Makevars
src/RcppExports.cpp
src/rvcf.cpp
src/vcf/variantIndex.hpp
src/vcf/exceptions.hpp
src/vcf/vcfReader.hpp
src/vcf/vcfReader.cpp
src/vcf/txtReader.cpp
src/vcf/vcfReaderDebug.cpp
src/vcf/global.hpp
src/vcf/variantIndex.cpp
src/vcf/txtReader.hpp
src/vcf/gzstream/gzstream.h
src/vcf/gzstream/COPYING.LIB
src/vcf/gzstream/test_gzip.C
src/vcf/gzstream/logo.gif
src/vcf/gzstream/README
src/vcf/gzstream/test_gunzip.C
src/vcf/gzstream/gzstream.cpp
src/vcf/gzstream/index.html
inst/extdata/PG0390-C.test.alt
inst/extdata/labStrains.test.exclude.txt
inst/extdata/labStrains.test.panel.txt
inst/extdata/PG0390-C.test.vcf.gz
inst/extdata/PG0390-C.test.ref
inst/extdata/labStrains.test.PLAF.txt
inst/extdata/deploid.png
inst/scripts/interpretDEploid.r inst/scripts/dataExplore.r
build/partial.rdb
tests/testthat.R tests/testthat/test-vcfreader.R tests/testthat/setup.R tests/testthat/test-extractFromVCF.R man/histWSAF.Rd man/plotWSAFvsPLAF.Rd man/extractPLAF.Rd man/plotProportions.Rd man/DEploid.utils-package.Rd man/extractCoverageFromVcf.Rd man/plotAltVsRef.Rd man/plotObsExpWSAF.Rd man/computeObsWSAF.Rd man/extractCoverageFromTxt.Rd man/haplotypePainter.Rd
DEploid.utils documentation built on April 3, 2025, 9:58 p.m.