extractModuleGO: Extract results from the module GO analysis

In DGCA: Differential Gene Correlation Analysis

Extract results from the module GO analysis

Description

Turns the list of lists from the moduleGO function into a more comprehensible data frame. Note that if a GO term enrichment does not exist for that module, it is set as NA.

Usage

extractModuleGO(moduleGO_list, labels = NULL)

Arguments

moduleGO_list	The list of list of data frames for each module to be turned into a data frame.
labels	Optional, a list of module names. Optional; if not inputted, these will be extracted from the list of module GO enrichments.

Value

A data frame summarizing the GO term enrichments from each group, with columns on the ordered by the minimum p-value for OR term enrichment in any group.

DGCA documentation built on March 31, 2023, 9:22 p.m.