DNAmotif: DNA Sequence Motifs

Motifs within biological sequences show a significant role. This package utilizes a user-defined threshold value (window size and similarity) to create consensus segments or motifs through local alignment of dynamic programming with gap and it calculates the frequency of each identified motif, offering a detailed view of their prevalence within the dataset. It allows for thorough exploration and understanding of sequence patterns and their biological importance.

Getting started

Package details

AuthorSubham Ghosh [aut, cre], UB Angadi [aut], Md Yeasin [aut], Dipro Sinha [aut], Saikath Das [aut]
MaintainerSubham Ghosh <search4aghosh@gmail.com>
LicenseGPL-3
Version0.1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("DNAmotif")

Try the DNAmotif package in your browser

Any scripts or data that you put into this service are public.

DNAmotif documentation built on June 22, 2024, 9:56 a.m.