DPBBM: Dirichlet Process Beta-Binomial Mixture
Version 0.2.5

Beta-binomial Mixture Model is used to infer the pattern from count data. It can be used for clustering of RNA methylation sequencing data.

Browse man pages Browse package API and functions Browse package files

AuthorLin Zhang
Date of publication2016-09-29 08:02:30
MaintainerLin Zhang <lin.zhang@cumt.edu.cn>
LicenseGPL (>= 2)
Version0.2.5
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("DPBBM")

Man pages

bbm_data_generate: bbm_data_generate
BCubed_metric: BCubed_metric
dpbbm_mc_iterations: dpbbm_mc_iterations
DPBBM-package: DPBBM

Functions

BCubed_metric Man page Source code
DPBBM Man page
DPBBM-package Man page
bbm_data_generate Man page Source code
choose_cluster_id_by_mode Source code
dpbbm_mc_iterations Man page Source code
dpbbm_mc_single_iter Source code
dpbbm_update_likelihood Source code
dpbbm_update_tau Source code
generate_u_param Source code
getmode Source code

Files

inst
inst/extdata
inst/extdata/DPBBM_example.html
inst/extdata/DPBBM_example.Rmd
inst/doc
inst/doc/DPBBM_example.pdf
NAMESPACE
NEWS
R
R/dpbbm_mc_iterations.r
R/generate_u_param.r
R/DPBBM-internal.R
R/dpbbm_update_tau.r
R/BCubed_metric.r
R/dpbbm_mc_single_iter.r
R/dpbbm_update_likelihood.r
R/choose_cluster_id_by_mode.r
R/bbm_data_generate.r
MD5
DESCRIPTION
man
man/DPBBM-package.Rd
man/dpbbm_mc_iterations.Rd
man/BCubed_metric.Rd
man/bbm_data_generate.Rd
DPBBM documentation built on May 19, 2017, 11:09 a.m.